Protein–RNA interactions for Protein: Q9C0K0

BCL11B, B-cell lymphoma/leukemia 11B, humanhuman

Predicted RBP Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL11BQ9C0K0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 RFNG-202ENST00000429557 994 ntTSL 5 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 AC022001.3-201ENST00000606330 596 ntBASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 AC091951.1-201ENST00000512854 2465 ntBASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 KRT8P25-201ENST00000473150 1456 ntBASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BCL11BQ9C0K0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 AC113398.1-201ENST00000464124 406 ntBASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 AC009712.1-201ENST00000564938 316 ntBASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 AC135178.5-201ENST00000602597 674 ntBASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 AC011498.7-201ENST00000624986 2027 ntBASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 AL109954.1-202ENST00000564051 2148 ntBASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCL11BQ9C0K0 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BCL11BQ9C0K0 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
BCL11BQ9C0K0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.79■□□□□ 0.44
BCL11BQ9C0K0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.79■□□□□ 0.44
BCL11BQ9C0K0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BCL11BQ9C0K0 STK25-235ENST00000543554 2556 ntTSL 2 BASIC17.79■□□□□ 0.44
BCL11BQ9C0K0 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BCL11BQ9C0K0 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.79■□□□□ 0.44
BCL11BQ9C0K0 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms