Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 AC139491.6-202ENST00000637171 2077 ntBASIC20.91■□□□□ 0.94
VPS8Q8N3P4 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 HNRNPA1P10-201ENST00000444945 962 ntBASIC20.91■□□□□ 0.94
VPS8Q8N3P4 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 IGHVII-74-1-201ENST00000517572 241 ntBASIC20.91■□□□□ 0.94
VPS8Q8N3P4 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 RN7SL596P-201ENST00000582123 288 ntBASIC20.91■□□□□ 0.94
VPS8Q8N3P4 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 AIFM1P1-201ENST00000413342 1841 ntBASIC20.91■□□□□ 0.94
VPS8Q8N3P4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VPS8Q8N3P4 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 AC005562.1-201ENST00000583030 3219 ntBASIC20.9■□□□□ 0.94
VPS8Q8N3P4 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 PSME2P2-201ENST00000453033 700 ntBASIC20.9■□□□□ 0.94
VPS8Q8N3P4 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 AC114271.1-201ENST00000612689 2813 ntBASIC20.9■□□□□ 0.94
VPS8Q8N3P4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 TP73-207ENST00000378290 1831 ntTSL 2 BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS8Q8N3P4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 IDS-203ENST00000428056 1213 ntTSL 2 BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC20.89■□□□□ 0.94
VPS8Q8N3P4 AL139339.2-201ENST00000608063 657 ntBASIC20.89■□□□□ 0.94
VPS8Q8N3P4 AC020904.3-201ENST00000624199 442 ntBASIC20.89■□□□□ 0.94
VPS8Q8N3P4 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 LILRP2-202ENST00000413572 1383 ntBASIC20.89■□□□□ 0.93
VPS8Q8N3P4 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 AC104590.1-202ENST00000558368 1921 ntBASIC20.89■□□□□ 0.93
VPS8Q8N3P4 PPT1-213ENST00000641319 2388 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms