Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 AC002350.2-201ENST00000623894 1828 ntBASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 HMGA1P1-201ENST00000415560 1062 ntBASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 RN7SL646P-201ENST00000492969 297 ntBASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 DNM1P50-201ENST00000565767 508 ntBASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 RN7SL827P-201ENST00000607480 288 ntBASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 KRT18P40-201ENST00000599859 1571 ntBASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 AC007191.1-201ENST00000623179 2995 ntBASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 SNORA30.1-201ENST00000363193 129 ntBASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 AC092473.1-201ENST00000441098 221 ntBASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 OR2A15P-201ENST00000463814 900 ntBASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 RN7SL111P-201ENST00000468841 285 ntBASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 DIS3L2P1-201ENST00000509197 559 ntBASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 AC079601.2-201ENST00000547729 775 ntBASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 MED25-209ENST00000612791 881 ntTSL 5 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 MDC1-209ENST00000613547 830 ntTSL 5 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 AC112702.1-201ENST00000623712 366 ntBASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms