Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ATRXP46100 ACTBP1-201ENST00000417985 1113 ntBASIC12.35□□□□□ -0.43
ATRXP46100 E2F6P4-201ENST00000468625 514 ntBASIC12.35□□□□□ -0.43
ATRXP46100 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ATRXP46100 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC12.35□□□□□ -0.43
ATRXP46100 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC12.35□□□□□ -0.43
ATRXP46100 AC091132.3-201ENST00000579701 470 ntBASIC12.35□□□□□ -0.43
ATRXP46100 AC138645.1-201ENST00000582765 470 ntBASIC12.35□□□□□ -0.43
ATRXP46100 CELF4-212ENST00000588597 1444 ntTSL 2 BASIC12.35□□□□□ -0.43
ATRXP46100 AC139749.1-202ENST00000617529 3139 ntBASIC12.35□□□□□ -0.43
ATRXP46100 ABHD11-AS1-202ENST00000641969 358 ntBASIC12.35□□□□□ -0.43
ATRXP46100 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ATRXP46100 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ATRXP46100 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ATRXP46100 AC012617.1-204ENST00000586340 2305 ntBASIC12.35□□□□□ -0.43
ATRXP46100 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC12.35□□□□□ -0.43
ATRXP46100 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ATRXP46100 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ATRXP46100 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 AC005014.1-201ENST00000432006 2976 ntBASIC12.34□□□□□ -0.43
ATRXP46100 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ATRXP46100 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.34□□□□□ -0.43
ATRXP46100 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 PDCD4-AS1-201ENST00000420367 778 ntTSL 2 BASIC12.34□□□□□ -0.43
ATRXP46100 AP000926.2-201ENST00000469983 358 ntBASIC12.34□□□□□ -0.43
ATRXP46100 AC005726.6-201ENST00000579019 1083 ntTSL 3 BASIC12.34□□□□□ -0.43
ATRXP46100 AC005336.1-201ENST00000585431 1243 ntBASIC12.34□□□□□ -0.43
ATRXP46100 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC12.34□□□□□ -0.43
ATRXP46100 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC12.34□□□□□ -0.43
ATRXP46100 GH2-205ENST00000622506 702 ntTSL 5 BASIC12.34□□□□□ -0.43
ATRXP46100 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ATRXP46100 AL109954.1-202ENST00000564051 2148 ntBASIC12.34□□□□□ -0.43
ATRXP46100 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
ATRXP46100 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC12.34□□□□□ -0.43
ATRXP46100 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.34□□□□□ -0.43
ATRXP46100 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.34□□□□□ -0.43
ATRXP46100 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.34□□□□□ -0.43
ATRXP46100 AL606760.3-201ENST00000569869 3591 ntBASIC12.34□□□□□ -0.43
ATRXP46100 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.34□□□□□ -0.43
ATRXP46100 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.34□□□□□ -0.43
ATRXP46100 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC12.34□□□□□ -0.43
ATRXP46100 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 TMIGD1-201ENST00000328886 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ATRXP46100 MRPL55-212ENST00000366739 641 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
ATRXP46100 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 MTND6P11-201ENST00000431890 483 ntBASIC12.34□□□□□ -0.43
ATRXP46100 AL139412.1-201ENST00000441085 523 ntTSL 2 BASIC12.34□□□□□ -0.43
ATRXP46100 LINC00313-206ENST00000441283 448 ntTSL 3 BASIC12.34□□□□□ -0.43
ATRXP46100 RPL21P135-201ENST00000442539 791 ntBASIC12.34□□□□□ -0.43
ATRXP46100 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 IGKV1-8-201ENST00000495489 398 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ATRXP46100 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ATRXP46100 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC12.34□□□□□ -0.43
ATRXP46100 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC12.34□□□□□ -0.43
ATRXP46100 CALM3-206ENST00000594523 540 ntTSL 4 BASIC12.34□□□□□ -0.43
ATRXP46100 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.34□□□□□ -0.43
ATRXP46100 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 AC089987.1-201ENST00000551654 2209 ntBASIC12.34□□□□□ -0.43
ATRXP46100 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ATRXP46100 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC12.34□□□□□ -0.43
ATRXP46100 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ATRXP46100 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.34□□□□□ -0.43
ATRXP46100 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
ATRXP46100 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
ATRXP46100 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC12.33□□□□□ -0.44
ATRXP46100 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ATRXP46100 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
ATRXP46100 RN7SL342P-201ENST00000479616 294 ntBASIC12.33□□□□□ -0.44
ATRXP46100 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ATRXP46100 AC021678.2-201ENST00000521731 887 ntTSL 2 BASIC12.33□□□□□ -0.44
ATRXP46100 EEF1DP8-201ENST00000534760 536 ntBASIC12.33□□□□□ -0.44
ATRXP46100 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC12.33□□□□□ -0.44
ATRXP46100 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC12.33□□□□□ -0.44
ATRXP46100 RN7SL733P-201ENST00000582253 329 ntBASIC12.33□□□□□ -0.44
ATRXP46100 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC12.33□□□□□ -0.44
ATRXP46100 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC12.33□□□□□ -0.44
ATRXP46100 AC022150.2-201ENST00000596451 644 ntTSL 3 BASIC12.33□□□□□ -0.44
ATRXP46100 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ATRXP46100 RN7SL248P-201ENST00000615117 329 ntBASIC12.33□□□□□ -0.44
ATRXP46100 RN7SL453P-201ENST00000620275 329 ntBASIC12.33□□□□□ -0.44
ATRXP46100 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC12.33□□□□□ -0.44
ATRXP46100 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms