Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.33□□□□□ -0.12
RB1P06400 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 DDC-212ENST00000615193 1674 ntTSL 3 BASIC14.33□□□□□ -0.12
RB1P06400 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.33□□□□□ -0.12
RB1P06400 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.32□□□□□ -0.12
RB1P06400 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
RB1P06400 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC14.32□□□□□ -0.12
RB1P06400 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
RB1P06400 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.32□□□□□ -0.12
RB1P06400 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.32□□□□□ -0.12
RB1P06400 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.32□□□□□ -0.12
RB1P06400 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RB1P06400 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.32□□□□□ -0.12
RB1P06400 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RB1P06400 AC005089.1-201ENST00000619486 2241 ntBASIC14.32□□□□□ -0.12
RB1P06400 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 RBMXP1-201ENST00000408004 1191 ntBASIC14.32□□□□□ -0.12
RB1P06400 RN7SL47P-201ENST00000488710 299 ntBASIC14.32□□□□□ -0.12
RB1P06400 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC14.32□□□□□ -0.12
RB1P06400 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC14.32□□□□□ -0.12
RB1P06400 CCNL2P1-201ENST00000512846 969 ntBASIC14.32□□□□□ -0.12
RB1P06400 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC14.32□□□□□ -0.12
RB1P06400 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC14.32□□□□□ -0.12
RB1P06400 AP001102.1-201ENST00000528959 409 ntBASIC14.32□□□□□ -0.12
RB1P06400 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC14.32□□□□□ -0.12
RB1P06400 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RB1P06400 NAT9-204ENST00000578822 839 ntTSL 3 BASIC14.32□□□□□ -0.12
RB1P06400 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RB1P06400 PSME2-217ENST00000615264 874 ntTSL 5 BASIC14.32□□□□□ -0.12
RB1P06400 AL450487.2-201ENST00000615934 407 ntBASIC14.32□□□□□ -0.12
RB1P06400 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC14.32□□□□□ -0.12
RB1P06400 PSME2-218ENST00000630027 185 ntTSL 3 BASIC14.32□□□□□ -0.12
RB1P06400 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC14.32□□□□□ -0.12
RB1P06400 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14.32□□□□□ -0.12
RB1P06400 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RB1P06400 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RB1P06400 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RB1P06400 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.32□□□□□ -0.12
RB1P06400 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RB1P06400 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.32□□□□□ -0.12
RB1P06400 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.31□□□□□ -0.12
RB1P06400 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RB1P06400 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RB1P06400 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
RB1P06400 ATF4P4-201ENST00000393544 1930 ntBASIC14.31□□□□□ -0.12
RB1P06400 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.31□□□□□ -0.12
RB1P06400 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.31□□□□□ -0.12
RB1P06400 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RB1P06400 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
RB1P06400 AP000437.1-201ENST00000624057 2085 ntBASIC14.31□□□□□ -0.12
RB1P06400 AL591499.1-201ENST00000307155 1153 ntBASIC14.31□□□□□ -0.12
RB1P06400 POP5-201ENST00000341039 913 ntTSL 2 BASIC14.31□□□□□ -0.12
RB1P06400 RNA5SP84-201ENST00000364740 107 ntBASIC14.31□□□□□ -0.12
RB1P06400 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC14.31□□□□□ -0.12
RB1P06400 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC14.31□□□□□ -0.12
RB1P06400 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC14.31□□□□□ -0.12
RB1P06400 RNASEH2CP1-201ENST00000454281 502 ntBASIC14.31□□□□□ -0.12
RB1P06400 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 AL161727.1-201ENST00000457409 530 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms