Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 MIR1307-201ENST00000408840 149 ntBASIC13.97□□□□□ -0.17
HACD3Q9P035 AL512306.1-201ENST00000432698 848 ntBASIC13.97□□□□□ -0.17
HACD3Q9P035 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HACD3Q9P035 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.97□□□□□ -0.17
HACD3Q9P035 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.97□□□□□ -0.17
HACD3Q9P035 CEP164P1-201ENST00000455142 418 ntBASIC13.97□□□□□ -0.17
HACD3Q9P035 SCARNA12-201ENST00000459155 270 ntBASIC13.97□□□□□ -0.17
HACD3Q9P035 AC138701.2-201ENST00000553634 226 ntBASIC13.97□□□□□ -0.17
HACD3Q9P035 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.97□□□□□ -0.17
HACD3Q9P035 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.97□□□□□ -0.17
HACD3Q9P035 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.97□□□□□ -0.17
HACD3Q9P035 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.97□□□□□ -0.17
HACD3Q9P035 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.97□□□□□ -0.17
HACD3Q9P035 AC009145.4-201ENST00000625119 1294 ntBASIC13.97□□□□□ -0.17
HACD3Q9P035 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.97□□□□□ -0.17
HACD3Q9P035 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HACD3Q9P035 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC13.97□□□□□ -0.17
HACD3Q9P035 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HACD3Q9P035 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.97□□□□□ -0.17
HACD3Q9P035 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HACD3Q9P035 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
HACD3Q9P035 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HACD3Q9P035 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HACD3Q9P035 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HACD3Q9P035 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HACD3Q9P035 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HACD3Q9P035 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HACD3Q9P035 AP002761.4-201ENST00000565433 3361 ntBASIC13.97□□□□□ -0.17
HACD3Q9P035 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HACD3Q9P035 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.97□□□□□ -0.17
HACD3Q9P035 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HACD3Q9P035 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.97□□□□□ -0.17
HACD3Q9P035 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.97□□□□□ -0.17
HACD3Q9P035 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
HACD3Q9P035 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
HACD3Q9P035 Z98885.3-201ENST00000624882 1757 ntBASIC13.96□□□□□ -0.17
HACD3Q9P035 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.96□□□□□ -0.17
HACD3Q9P035 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
HACD3Q9P035 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.96□□□□□ -0.17
HACD3Q9P035 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 PES1P2-201ENST00000449745 1735 ntBASIC13.96□□□□□ -0.17
HACD3Q9P035 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
HACD3Q9P035 AC020763.3-201ENST00000625095 2904 ntBASIC13.96□□□□□ -0.17
HACD3Q9P035 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.96□□□□□ -0.17
HACD3Q9P035 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.96□□□□□ -0.17
HACD3Q9P035 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.96□□□□□ -0.17
HACD3Q9P035 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HACD3Q9P035 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.96□□□□□ -0.17
HACD3Q9P035 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HACD3Q9P035 RN7SL767P-201ENST00000493013 295 ntBASIC13.96□□□□□ -0.17
HACD3Q9P035 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.96□□□□□ -0.17
HACD3Q9P035 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.96□□□□□ -0.17
HACD3Q9P035 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.96□□□□□ -0.17
HACD3Q9P035 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.96□□□□□ -0.17
HACD3Q9P035 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.96□□□□□ -0.17
HACD3Q9P035 AP005264.5-201ENST00000590066 467 ntBASIC13.96□□□□□ -0.17
HACD3Q9P035 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.96□□□□□ -0.17
HACD3Q9P035 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.96□□□□□ -0.17
HACD3Q9P035 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.96□□□□□ -0.17
HACD3Q9P035 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HACD3Q9P035 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HACD3Q9P035 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HACD3Q9P035 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HACD3Q9P035 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
HACD3Q9P035 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
HACD3Q9P035 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HACD3Q9P035 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HACD3Q9P035 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HACD3Q9P035 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.96□□□□□ -0.18
HACD3Q9P035 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
HACD3Q9P035 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HACD3Q9P035 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HACD3Q9P035 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
HACD3Q9P035 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.96□□□□□ -0.18
HACD3Q9P035 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.95□□□□□ -0.18
HACD3Q9P035 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HACD3Q9P035 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms