Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.35
AMBRA1Q9C0C7 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 AC008040.5-201ENST00000599781 1781 ntBASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 CICP9-201ENST00000444451 1913 ntBASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 AC022497.1-201ENST00000624916 3691 ntBASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 AC092117.1-201ENST00000621230 3250 ntBASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC12.89□□□□□ -0.35
AMBRA1Q9C0C7 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 AC004899.1-201ENST00000424687 1714 ntBASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 AP001258.2-201ENST00000529891 490 ntBASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AMBRA1Q9C0C7 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms