Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC253576.2-201ENST00000618815 580 ntBASIC12.61□□□□□ -0.39
USB1Q9BQ65 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 AC128714.1-201ENST00000637035 887 ntBASIC12.61□□□□□ -0.39
USB1Q9BQ65 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 TBC1D3J-201ENST00000620719 1426 ntBASIC12.61□□□□□ -0.39
USB1Q9BQ65 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 AC102953.2-201ENST00000609755 3026 ntBASIC12.61□□□□□ -0.39
USB1Q9BQ65 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 AC130709.1-201ENST00000484779 1212 ntBASIC12.6□□□□□ -0.39
USB1Q9BQ65 AC019193.1-201ENST00000506678 823 ntBASIC12.6□□□□□ -0.39
USB1Q9BQ65 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 AC010460.2-201ENST00000509054 677 ntBASIC12.6□□□□□ -0.39
USB1Q9BQ65 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 AC026803.1-201ENST00000569130 274 ntBASIC12.6□□□□□ -0.39
USB1Q9BQ65 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 NDE1P2-201ENST00000605569 1105 ntBASIC12.6□□□□□ -0.39
USB1Q9BQ65 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 AC099654.11-201ENST00000638857 294 ntBASIC12.6□□□□□ -0.39
USB1Q9BQ65 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 LINC02139-201ENST00000612023 2005 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.6□□□□□ -0.39
USB1Q9BQ65 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USB1Q9BQ65 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
USB1Q9BQ65 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USB1Q9BQ65 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USB1Q9BQ65 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
USB1Q9BQ65 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.59□□□□□ -0.39
USB1Q9BQ65 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
USB1Q9BQ65 AL031595.1-201ENST00000623969 4709 ntBASIC12.59□□□□□ -0.39
USB1Q9BQ65 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.59□□□□□ -0.39
USB1Q9BQ65 LINC01165-201ENST00000445190 1623 ntBASIC12.59□□□□□ -0.39
USB1Q9BQ65 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
USB1Q9BQ65 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USB1Q9BQ65 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USB1Q9BQ65 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
USB1Q9BQ65 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USB1Q9BQ65 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USB1Q9BQ65 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USB1Q9BQ65 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.59□□□□□ -0.39
USB1Q9BQ65 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms