RNA–Protein interactions for RNA: ENST00000605569.1

NDE1P2-201, Transcript of nudE neurodevelopment protein 1 pseudogene 2, humanhuman

BASIC

Gene NDE1P2, Length 1,105 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1P2-201ENST00000605569 AEBP2Q6ZN18 517 aaPredicted RBP30.34■■■□□ 2.45
NDE1P2-201ENST00000605569 CHIC1Q5VXU3 224 aa29.92■■■□□ 2.38
NDE1P2-201ENST00000605569 PHF23Q9BUL5 403 aaPredicted RBP26.32■■□□□ 1.8
NDE1P2-201ENST00000605569 SENP3Q9H4L4 574 aaPredicted RBP25.76■■□□□ 1.71
NDE1P2-201ENST00000605569 PLPPR3Q6T4P5 718 aa24.43■■□□□ 1.5
NDE1P2-201ENST00000605569 FOXD1Q16676 465 aa23.84■■□□□ 1.41
NDE1P2-201ENST00000605569 ADRA2BP18089 450 aa23.15■■□□□ 1.3
NDE1P2-201ENST00000605569 PPP6R1Q9UPN7 881 aa23.14■■□□□ 1.29
NDE1P2-201ENST00000605569 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
NDE1P2-201ENST00000605569 PIAS4Q8N2W9 510 aaPredicted RBP22.55■■□□□ 1.2
NDE1P2-201ENST00000605569 MSH5O43196 834 aa21.92■■□□□ 1.1
NDE1P2-201ENST00000605569 PPP4R3CPQ6ZMV5 832 aa21.55■■□□□ 1.04
NDE1P2-201ENST00000605569 KCNA4P22459 653 aa21.32■■□□□ 1
NDE1P2-201ENST00000605569 SCAF1Q9H7N4 1312 aaKnown RBP21.25■□□□□ 0.99
NDE1P2-201ENST00000605569 NCBP3Q53F19 620 aaKnown RBP21.11■□□□□ 0.97
NDE1P2-201ENST00000605569 MAPK8IP2Q13387 824 aaPredicted RBP20.93■□□□□ 0.94
NDE1P2-201ENST00000605569 CNKSR2Q8WXI2 1034 aa20.9■□□□□ 0.94
NDE1P2-201ENST00000605569 NPM3O75607 178 aaKnown RBP20.74■□□□□ 0.91
NDE1P2-201ENST00000605569 DMRT2Q9Y5R5 561 aa20.59■□□□□ 0.89
NDE1P2-201ENST00000605569 RNF216Q9NWF9 866 aaPredicted RBP20.43■□□□□ 0.86
NDE1P2-201ENST00000605569 SLC4A1APQ9BWU0 796 aaKnown RBP20.38■□□□□ 0.85
NDE1P2-201ENST00000605569 HOXD11P31277 338 aaPredicted RBP20.27■□□□□ 0.84
NDE1P2-201ENST00000605569 CCDC180Q9P1Z9 1646 aa20.19■□□□□ 0.82
NDE1P2-201ENST00000605569 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
NDE1P2-201ENST00000605569 EHMT2Q96KQ7 1210 aa20.07■□□□□ 0.8
NDE1P2-201ENST00000605569 ABCC9O60706 1549 aa20.05■□□□□ 0.8
NDE1P2-201ENST00000605569 CSRNP3Q8WYN3 585 aa19.73■□□□□ 0.75
NDE1P2-201ENST00000605569 DCAF8L1A6NGE4 600 aa19.7■□□□□ 0.74
NDE1P2-201ENST00000605569 ZBTB22O15209 634 aa19.6■□□□□ 0.73
NDE1P2-201ENST00000605569 FOXD4L1Q9NU39 408 aa19.57■□□□□ 0.72
NDE1P2-201ENST00000605569 SLC4A2P04920 1241 aa19.52■□□□□ 0.72
NDE1P2-201ENST00000605569 POTEDQ86YR6 584 aa19.47■□□□□ 0.71
NDE1P2-201ENST00000605569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.34■□□□□ 0.69
NDE1P2-201ENST00000605569 MYCNP04198 464 aaPredicted RBP19.17■□□□□ 0.66
NDE1P2-201ENST00000605569 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
NDE1P2-201ENST00000605569 DCAF8L2P0C7V8 631 aa19.06■□□□□ 0.64
NDE1P2-201ENST00000605569 NACADO15069 1562 aa19.03■□□□□ 0.64
NDE1P2-201ENST00000605569 U3KPZ7 1027 aaPredicted RBP19.02■□□□□ 0.64
NDE1P2-201ENST00000605569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.93■□□□□ 0.62
NDE1P2-201ENST00000605569 HNRNPUL2Q1KMD3 747 aaKnown RBP18.93■□□□□ 0.62
NDE1P2-201ENST00000605569 ATXN8OSP0DMR3 200 aa18.9■□□□□ 0.62
NDE1P2-201ENST00000605569 SAMD1Q6SPF0 538 aaPredicted RBP18.86■□□□□ 0.61
NDE1P2-201ENST00000605569 ZCCHC6Q5VYS8 1495 aaKnown RBP18.84■□□□□ 0.61
NDE1P2-201ENST00000605569 MYO15BQ96JP2 1530 aa18.83■□□□□ 0.6
NDE1P2-201ENST00000605569 RNF39Q9H2S5 420 aa18.79■□□□□ 0.6
NDE1P2-201ENST00000605569 UNC13AQ9UPW8 1703 aa18.74■□□□□ 0.59
NDE1P2-201ENST00000605569 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
NDE1P2-201ENST00000605569 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
NDE1P2-201ENST00000605569 APLP2Q06481 763 aa18.68■□□□□ 0.58
NDE1P2-201ENST00000605569 BICRAQ9NZM4 1560 aa18.62■□□□□ 0.57
NDE1P2-201ENST00000605569 C1QBPQ07021 282 aaKnown RBP18.61■□□□□ 0.57
NDE1P2-201ENST00000605569 ATF5Q9Y2D1 282 aaPredicted RBP18.61■□□□□ 0.57
NDE1P2-201ENST00000605569 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
NDE1P2-201ENST00000605569 SPINK5Q9NQ38 1064 aaPredicted RBP18.4■□□□□ 0.54
NDE1P2-201ENST00000605569 CAPN15O75808 1086 aa18.35■□□□□ 0.53
NDE1P2-201ENST00000605569 ZNF219Q9P2Y4 722 aaPredicted RBP18.35■□□□□ 0.53
NDE1P2-201ENST00000605569 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
NDE1P2-201ENST00000605569 SHROOM4Q9ULL8 1493 aa18.27■□□□□ 0.52
NDE1P2-201ENST00000605569 CACNB1Q02641 598 aaPredicted RBP18.13■□□□□ 0.49
NDE1P2-201ENST00000605569 EIF4G1Q04637 1599 aaKnown RBP18.11■□□□□ 0.49
NDE1P2-201ENST00000605569 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
NDE1P2-201ENST00000605569 POLA2Q14181 598 aa18.09■□□□□ 0.49
NDE1P2-201ENST00000605569 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
NDE1P2-201ENST00000605569 ABCB7O75027 752 aa17.99■□□□□ 0.47
NDE1P2-201ENST00000605569 DSG3P32926 999 aa17.96■□□□□ 0.47
NDE1P2-201ENST00000605569 FBLN2P98095 1184 aa17.88■□□□□ 0.45
NDE1P2-201ENST00000605569 FKBP8Q14318 412 aa17.83■□□□□ 0.44
NDE1P2-201ENST00000605569 ZBTB12Q9Y330 459 aaPredicted RBP17.83■□□□□ 0.44
NDE1P2-201ENST00000605569 MKRN4PQ13434 485 aaPredicted RBP17.82■□□□□ 0.44
NDE1P2-201ENST00000605569 SMARCA4P51532 1647 aa17.64■□□□□ 0.41
NDE1P2-201ENST00000605569 ATAD2BQ9ULI0 1458 aa17.6■□□□□ 0.41
NDE1P2-201ENST00000605569 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
NDE1P2-201ENST00000605569 SPDYE4A6NLX3 237 aa17.58■□□□□ 0.4
NDE1P2-201ENST00000605569 BAZ1AQ9NRL2 1556 aaPredicted RBP17.54■□□□□ 0.4
NDE1P2-201ENST00000605569 SMARCA2P51531 1590 aa17.52■□□□□ 0.39
NDE1P2-201ENST00000605569 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.39
NDE1P2-201ENST00000605569 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
NDE1P2-201ENST00000605569 PEG3Q9GZU2 1588 aa17.44■□□□□ 0.38
NDE1P2-201ENST00000605569 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
NDE1P2-201ENST00000605569 BAZ1BQ9UIG0 1483 aaKnown RBP17.43■□□□□ 0.38
NDE1P2-201ENST00000605569 SPDYE2BA6NHP3 402 aa17.36■□□□□ 0.37
NDE1P2-201ENST00000605569 SPDYE6P0CI01 402 aa17.36■□□□□ 0.37
NDE1P2-201ENST00000605569 SPDYE2Q495Y8 402 aa17.36■□□□□ 0.37
NDE1P2-201ENST00000605569 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
NDE1P2-201ENST00000605569 NESP48681 1621 aa17.32■□□□□ 0.36
NDE1P2-201ENST00000605569 WIZO95785 1651 aa17.3■□□□□ 0.36
NDE1P2-201ENST00000605569 PROM2Q8N271 834 aa17.3■□□□□ 0.36
NDE1P2-201ENST00000605569 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
NDE1P2-201ENST00000605569 SSUH2Q9Y2M2 353 aa17.23■□□□□ 0.35
NDE1P2-201ENST00000605569 RSF1Q96T23 1441 aaPredicted RBP17.22■□□□□ 0.35
NDE1P2-201ENST00000605569 FBXO3Q9UK99 471 aa17.18■□□□□ 0.34
NDE1P2-201ENST00000605569 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
NDE1P2-201ENST00000605569 LAMC3Q9Y6N6 1575 aa17.14■□□□□ 0.33
NDE1P2-201ENST00000605569 CUX2O14529 1486 aa17.11■□□□□ 0.33
NDE1P2-201ENST00000605569 CADPSQ9ULU8 1353 aa17.08■□□□□ 0.32
NDE1P2-201ENST00000605569 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
NDE1P2-201ENST00000605569 KIF21AQ7Z4S6 1674 aa17.06■□□□□ 0.32
NDE1P2-201ENST00000605569 THOC2Q8NI27 1593 aaKnown RBP17.04■□□□□ 0.32
NDE1P2-201ENST00000605569 PDS5BQ9NTI5 1447 aa17.03■□□□□ 0.32
NDE1P2-201ENST00000605569 AKT1S1Q96B36 256 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms