Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
AP3S1Q92572 AC093004.1-201ENST00000508850 424 ntBASIC12.13□□□□□ -0.47
AP3S1Q92572 IGHV3-42-201ENST00000520410 361 ntBASIC12.13□□□□□ -0.47
AP3S1Q92572 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.13□□□□□ -0.47
AP3S1Q92572 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 AC025678.2-201ENST00000562061 970 ntBASIC12.13□□□□□ -0.47
AP3S1Q92572 CLUHP6-201ENST00000580789 941 ntBASIC12.13□□□□□ -0.47
AP3S1Q92572 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.13□□□□□ -0.47
AP3S1Q92572 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.13□□□□□ -0.47
AP3S1Q92572 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.13□□□□□ -0.47
AP3S1Q92572 MIR8072-201ENST00000614241 80 ntBASIC12.13□□□□□ -0.47
AP3S1Q92572 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.13□□□□□ -0.47
AP3S1Q92572 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC12.13□□□□□ -0.47
AP3S1Q92572 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
AP3S1Q92572 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
AP3S1Q92572 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
AP3S1Q92572 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
AP3S1Q92572 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
AP3S1Q92572 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC12.13□□□□□ -0.47
AP3S1Q92572 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC12.13□□□□□ -0.47
AP3S1Q92572 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.12□□□□□ -0.47
AP3S1Q92572 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC12.12□□□□□ -0.47
AP3S1Q92572 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.12□□□□□ -0.47
AP3S1Q92572 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
AP3S1Q92572 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
AP3S1Q92572 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
AP3S1Q92572 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC12.12□□□□□ -0.47
AP3S1Q92572 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.12□□□□□ -0.47
AP3S1Q92572 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
AP3S1Q92572 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.12□□□□□ -0.47
AP3S1Q92572 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.12□□□□□ -0.47
AP3S1Q92572 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 AC211486.1-202ENST00000416371 468 ntBASIC12.12□□□□□ -0.47
AP3S1Q92572 CNN2P11-201ENST00000429351 262 ntBASIC12.12□□□□□ -0.47
AP3S1Q92572 AC002472.2-201ENST00000442739 958 ntBASIC12.12□□□□□ -0.47
AP3S1Q92572 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.12□□□□□ -0.47
AP3S1Q92572 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 AC211476.1-201ENST00000503899 468 ntBASIC12.12□□□□□ -0.47
AP3S1Q92572 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.12□□□□□ -0.47
AP3S1Q92572 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.12□□□□□ -0.47
AP3S1Q92572 AC109322.1-201ENST00000524499 1264 ntBASIC12.12□□□□□ -0.47
AP3S1Q92572 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.12□□□□□ -0.47
AP3S1Q92572 CR383656.12-201ENST00000549567 513 ntBASIC12.12□□□□□ -0.47
AP3S1Q92572 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.12□□□□□ -0.47
AP3S1Q92572 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.12□□□□□ -0.47
AP3S1Q92572 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.12□□□□□ -0.47
AP3S1Q92572 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.12□□□□□ -0.47
AP3S1Q92572 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.12□□□□□ -0.47
AP3S1Q92572 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
AP3S1Q92572 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
AP3S1Q92572 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 AC022144.1-201ENST00000602255 1580 ntBASIC12.12□□□□□ -0.47
AP3S1Q92572 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.12□□□□□ -0.47
AP3S1Q92572 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
AP3S1Q92572 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
AP3S1Q92572 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
AP3S1Q92572 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP3S1Q92572 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms