Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
CCDC144NLQ6NUI1 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC11.21□□□□□ -0.62
CCDC144NLQ6NUI1 CES1P1-201ENST00000421606 1704 ntBASIC11.21□□□□□ -0.62
CCDC144NLQ6NUI1 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.21□□□□□ -0.62
CCDC144NLQ6NUI1 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 FTX-216ENST00000638985 1367 ntTSL 5 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 NCLP1-201ENST00000445357 1963 ntBASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 AC092506.1-202ENST00000401022 528 ntBASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 AC093300.1-201ENST00000510368 1201 ntBASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 GOLGA8UP-201ENST00000527159 1755 ntBASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 AC040160.2-201ENST00000623816 1675 ntBASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC11.2□□□□□ -0.62
CCDC144NLQ6NUI1 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 DDC-204ENST00000426377 1700 ntTSL 3 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 SOD2-202ENST00000367054 815 ntTSL 2 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 SSR4-202ENST00000370085 526 ntTSL 2 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 ABCD1P4-201ENST00000399687 604 ntBASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 RN7SL564P-201ENST00000496309 250 ntBASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 PRSS3P1-201ENST00000503996 742 ntBASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC11.19□□□□□ -0.62
CCDC144NLQ6NUI1 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms