Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.98□□□□□ -0.33
RAE1P78406 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.98□□□□□ -0.33
RAE1P78406 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC12.98□□□□□ -0.33
RAE1P78406 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.98□□□□□ -0.33
RAE1P78406 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC12.98□□□□□ -0.33
RAE1P78406 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 AC087386.2-201ENST00000623212 4637 ntBASIC12.98□□□□□ -0.33
RAE1P78406 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.98□□□□□ -0.33
RAE1P78406 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RAE1P78406 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RAE1P78406 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RAE1P78406 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.97□□□□□ -0.33
RAE1P78406 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 AC090502.4-201ENST00000551714 1386 ntBASIC12.97□□□□□ -0.33
RAE1P78406 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RAE1P78406 CICP1-201ENST00000416803 2410 ntBASIC12.97□□□□□ -0.33
RAE1P78406 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.97□□□□□ -0.33
RAE1P78406 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.97□□□□□ -0.33
RAE1P78406 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.97□□□□□ -0.33
RAE1P78406 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.97□□□□□ -0.33
RAE1P78406 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.97□□□□□ -0.33
RAE1P78406 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.97□□□□□ -0.33
RAE1P78406 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.97□□□□□ -0.33
RAE1P78406 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.97□□□□□ -0.33
RAE1P78406 ORAOV1P1-201ENST00000503108 395 ntBASIC12.97□□□□□ -0.33
RAE1P78406 PIGCP1-201ENST00000527583 895 ntBASIC12.97□□□□□ -0.33
RAE1P78406 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.97□□□□□ -0.33
RAE1P78406 FGFR3P5-201ENST00000564496 886 ntBASIC12.97□□□□□ -0.33
RAE1P78406 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.97□□□□□ -0.33
RAE1P78406 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.97□□□□□ -0.33
RAE1P78406 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RAE1P78406 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RAE1P78406 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.97□□□□□ -0.33
RAE1P78406 AC091812.3-201ENST00000621362 345 ntBASIC12.97□□□□□ -0.33
RAE1P78406 AL139099.5-201ENST00000635274 300 ntBASIC12.97□□□□□ -0.33
RAE1P78406 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RAE1P78406 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.97□□□□□ -0.33
RAE1P78406 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.97□□□□□ -0.33
RAE1P78406 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.97□□□□□ -0.33
RAE1P78406 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.97□□□□□ -0.33
RAE1P78406 AL031587.5-201ENST00000624344 1849 ntBASIC12.97□□□□□ -0.33
RAE1P78406 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.97□□□□□ -0.33
RAE1P78406 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
RAE1P78406 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAE1P78406 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
RAE1P78406 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.96□□□□□ -0.33
RAE1P78406 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.96□□□□□ -0.33
RAE1P78406 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.96□□□□□ -0.33
RAE1P78406 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 AC005154.3-201ENST00000419639 1393 ntBASIC12.96□□□□□ -0.33
RAE1P78406 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.96□□□□□ -0.33
RAE1P78406 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.96□□□□□ -0.33
RAE1P78406 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.96□□□□□ -0.33
RAE1P78406 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
RAE1P78406 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.96□□□□□ -0.33
RAE1P78406 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.96□□□□□ -0.33
RAE1P78406 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC12.96□□□□□ -0.33
RAE1P78406 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC12.96□□□□□ -0.33
RAE1P78406 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
RAE1P78406 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms