Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF397Q8NF99 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF397Q8NF99 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF397Q8NF99 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
ZNF397Q8NF99 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF397Q8NF99 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF397Q8NF99 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF397Q8NF99 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF397Q8NF99 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF397Q8NF99 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF397Q8NF99 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF397Q8NF99 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 TUBB8P8-201ENST00000458717 1058 ntBASIC15.31■□□□□ 0.04
ZNF397Q8NF99 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.31■□□□□ 0.04
ZNF397Q8NF99 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 AC005324.6-201ENST00000587972 613 ntBASIC15.31■□□□□ 0.04
ZNF397Q8NF99 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 AP002353.1-201ENST00000528257 1599 ntBASIC15.31■□□□□ 0.04
ZNF397Q8NF99 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 FMO6P-201ENST00000236166 1620 ntBASIC15.31■□□□□ 0.04
ZNF397Q8NF99 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 MARK2P16-201ENST00000605714 1723 ntBASIC15.31■□□□□ 0.04
ZNF397Q8NF99 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF397Q8NF99 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 KRT18P36-201ENST00000411618 1276 ntBASIC15.3■□□□□ 0.04
ZNF397Q8NF99 KRT8P29-201ENST00000420409 1371 ntBASIC15.3■□□□□ 0.04
ZNF397Q8NF99 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 OR2R1P-201ENST00000441404 914 ntBASIC15.3■□□□□ 0.04
ZNF397Q8NF99 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF397Q8NF99 AP000346.4-201ENST00000614827 381 ntBASIC15.3■□□□□ 0.04
ZNF397Q8NF99 AL023803.2-201ENST00000620080 638 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms