Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC17.07■□□□□ 0.32
COL15A1P39059 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC17.07■□□□□ 0.32
COL15A1P39059 AC113398.1-201ENST00000464124 406 ntBASIC17.07■□□□□ 0.32
COL15A1P39059 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC17.07■□□□□ 0.32
COL15A1P39059 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC17.07■□□□□ 0.32
COL15A1P39059 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC17.07■□□□□ 0.32
COL15A1P39059 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC17.07■□□□□ 0.32
COL15A1P39059 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC17.07■□□□□ 0.32
COL15A1P39059 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC17.07■□□□□ 0.32
COL15A1P39059 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC17.07■□□□□ 0.32
COL15A1P39059 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC17.07■□□□□ 0.32
COL15A1P39059 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC17.07■□□□□ 0.32
COL15A1P39059 AP000553.2-201ENST00000609038 441 ntBASIC17.07■□□□□ 0.32
COL15A1P39059 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC17.07■□□□□ 0.32
COL15A1P39059 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
COL15A1P39059 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC17.07■□□□□ 0.32
COL15A1P39059 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.07■□□□□ 0.32
COL15A1P39059 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC17.07■□□□□ 0.32
COL15A1P39059 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC17.07■□□□□ 0.32
COL15A1P39059 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
COL15A1P39059 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 MKRN7P-201ENST00000433469 1371 ntBASIC17.07■□□□□ 0.32
COL15A1P39059 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.07■□□□□ 0.32
COL15A1P39059 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.07■□□□□ 0.32
COL15A1P39059 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.07■□□□□ 0.32
COL15A1P39059 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.07■□□□□ 0.32
COL15A1P39059 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COL15A1P39059 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 AC135782.3-201ENST00000562782 2105 ntBASIC17.06■□□□□ 0.32
COL15A1P39059 DDC-214ENST00000622873 1839 ntTSL 3 BASIC17.06■□□□□ 0.32
COL15A1P39059 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
COL15A1P39059 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC17.06■□□□□ 0.32
COL15A1P39059 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
COL15A1P39059 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
COL15A1P39059 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 SNX15-201ENST00000352068 771 ntTSL 5 BASIC17.06■□□□□ 0.32
COL15A1P39059 SNORD88B-201ENST00000408454 91 ntBASIC17.06■□□□□ 0.32
COL15A1P39059 TPT1P9-201ENST00000413759 514 ntBASIC17.06■□□□□ 0.32
COL15A1P39059 IQCF4-203ENST00000428561 420 ntBASIC17.06■□□□□ 0.32
COL15A1P39059 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC17.06■□□□□ 0.32
COL15A1P39059 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC17.06■□□□□ 0.32
COL15A1P39059 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 RN7SL838P-201ENST00000481676 295 ntBASIC17.06■□□□□ 0.32
COL15A1P39059 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC17.06■□□□□ 0.32
COL15A1P39059 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC17.06■□□□□ 0.32
COL15A1P39059 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC17.06■□□□□ 0.32
COL15A1P39059 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC17.06■□□□□ 0.32
COL15A1P39059 AC211476.2-201ENST00000608799 708 ntBASIC17.06■□□□□ 0.32
COL15A1P39059 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC17.06■□□□□ 0.32
COL15A1P39059 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 AL590556.2-202ENST00000636906 844 ntBASIC17.06■□□□□ 0.32
COL15A1P39059 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC17.06■□□□□ 0.32
COL15A1P39059 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC17.06■□□□□ 0.32
COL15A1P39059 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
COL15A1P39059 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
COL15A1P39059 GBAP1-208ENST00000566701 1546 ntBASIC17.06■□□□□ 0.32
COL15A1P39059 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL15A1P39059 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.05■□□□□ 0.32
COL15A1P39059 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC17.05■□□□□ 0.32
COL15A1P39059 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 CCL25-202ENST00000315626 450 ntTSL 2 BASIC17.05■□□□□ 0.32
COL15A1P39059 RN7SKP255-201ENST00000363442 313 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms