Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 AL627422.1-201ENST00000434104 580 ntBASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 CHCHD2P9-201ENST00000461726 456 ntBASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 ORAOV1P1-201ENST00000503108 395 ntBASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 AC138701.2-201ENST00000553634 226 ntBASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 RHOQP1-201ENST00000555758 579 ntBASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 MIR4265-201ENST00000582152 99 ntBASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 NCLP1-201ENST00000445357 1963 ntBASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 MARK2P9-201ENST00000430958 1727 ntBASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 AL139385.1-201ENST00000611744 3272 ntBASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 AC025183.3-201ENST00000623526 1482 ntBASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 SNORA50C-201ENST00000408535 133 ntBASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 SNORA50.1-201ENST00000628590 135 ntBASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 FP325330.2-201ENST00000624219 5630 ntBASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 AC092053.3-201ENST00000641308 4975 ntBASIC14.4□□□□□ -0.1
PPARGC1AQ9UBK2 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
PPARGC1AQ9UBK2 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PPARGC1AQ9UBK2 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PPARGC1AQ9UBK2 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PPARGC1AQ9UBK2 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PPARGC1AQ9UBK2 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PPARGC1AQ9UBK2 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PPARGC1AQ9UBK2 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.39□□□□□ -0.11
PPARGC1AQ9UBK2 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PPARGC1AQ9UBK2 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PPARGC1AQ9UBK2 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PPARGC1AQ9UBK2 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms