Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 AC245140.2-201ENST00000624054 1939 ntBASIC13□□□□□ -0.33
THUMPD1Q9NXG2 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 DNAJB1P1-201ENST00000429417 1024 ntBASIC13□□□□□ -0.33
THUMPD1Q9NXG2 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 NAP1L6-202ENST00000641404 1222 ntBASIC13□□□□□ -0.33
THUMPD1Q9NXG2 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13□□□□□ -0.33
THUMPD1Q9NXG2 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 AC011481.3-201ENST00000623895 5594 ntBASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 NRADDP-202ENST00000641269 1585 ntBASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 TUBB2BP1-201ENST00000404155 871 ntBASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 LINC00265-2P-201ENST00000413372 782 ntBASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 OR8T1P-201ENST00000421347 918 ntBASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.99□□□□□ -0.33
THUMPD1Q9NXG2 NDUFB10P1-201ENST00000567319 521 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms