Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 AC020763.3-201ENST00000625095 2904 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 AL512430.1-201ENST00000392575 860 ntBASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 AC130709.1-201ENST00000484779 1212 ntBASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 AC135782.3-201ENST00000562782 2105 ntBASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 ABCD1P2-201ENST00000429313 1601 ntBASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 PES1P2-201ENST00000449745 1735 ntBASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 AC007614.4-201ENST00000564048 1827 ntBASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 AL031432.4-201ENST00000641729 2190 ntBASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 AC005562.1-201ENST00000583030 3219 ntBASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 NRADDP-202ENST00000641269 1585 ntBASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CUEDC1Q9NWM3 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 PDXDC2P-206ENST00000534700 1315 ntBASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms