Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 AC090114.2-201ENST00000608477 7054 ntBASIC11.86□□□□□ -0.51
NICN1Q9BSH3 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 NDUFAB1P1-201ENST00000404262 460 ntBASIC11.86□□□□□ -0.51
NICN1Q9BSH3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 COX5BP8-201ENST00000416911 349 ntBASIC11.86□□□□□ -0.51
NICN1Q9BSH3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 KLF2P4-201ENST00000451959 1225 ntBASIC11.86□□□□□ -0.51
NICN1Q9BSH3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 AL356740.1-201ENST00000602192 1297 ntBASIC11.86□□□□□ -0.51
NICN1Q9BSH3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 HSPA8P9-201ENST00000485881 1943 ntBASIC11.86□□□□□ -0.51
NICN1Q9BSH3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 FAM95B1-212ENST00000592873 4692 ntBASIC11.86□□□□□ -0.51
NICN1Q9BSH3 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NICN1Q9BSH3 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 AC015819.3-201ENST00000624305 2674 ntBASIC11.85□□□□□ -0.51
NICN1Q9BSH3 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 AC022400.8-201ENST00000623453 3599 ntBASIC11.85□□□□□ -0.51
NICN1Q9BSH3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 PCDHB17P-202ENST00000623466 3066 ntBASIC11.85□□□□□ -0.51
NICN1Q9BSH3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC11.85□□□□□ -0.51
NICN1Q9BSH3 AC011742.3-201ENST00000439053 820 ntBASIC11.85□□□□□ -0.51
NICN1Q9BSH3 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms