Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TNNI2P48788 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 CCL19-202ENST00000378800 414 ntTSL 2 BASIC16.24■□□□□ 0.19
TNNI2P48788 SNORA57-201ENST00000383870 149 ntBASIC16.24■□□□□ 0.19
TNNI2P48788 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC16.24■□□□□ 0.19
TNNI2P48788 AL157823.1-201ENST00000403727 628 ntBASIC16.24■□□□□ 0.19
TNNI2P48788 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC16.24■□□□□ 0.19
TNNI2P48788 PHBP10-201ENST00000416467 784 ntBASIC16.24■□□□□ 0.19
TNNI2P48788 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC16.24■□□□□ 0.19
TNNI2P48788 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC16.24■□□□□ 0.19
TNNI2P48788 HNRNPA3P12-201ENST00000437410 1063 ntBASIC16.24■□□□□ 0.19
TNNI2P48788 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC16.24■□□□□ 0.19
TNNI2P48788 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC16.24■□□□□ 0.19
TNNI2P48788 AP000533.1-201ENST00000456143 1177 ntBASIC16.24■□□□□ 0.19
TNNI2P48788 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.24■□□□□ 0.19
TNNI2P48788 IGHVII-74-1-201ENST00000517572 241 ntBASIC16.24■□□□□ 0.19
TNNI2P48788 BMF-206ENST00000558774 671 ntTSL 3 BASIC16.24■□□□□ 0.19
TNNI2P48788 RN7SL134P-201ENST00000579756 303 ntBASIC16.24■□□□□ 0.19
TNNI2P48788 AC006116.2-201ENST00000589958 988 ntBASIC16.24■□□□□ 0.19
TNNI2P48788 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC16.24■□□□□ 0.19
TNNI2P48788 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC16.24■□□□□ 0.19
TNNI2P48788 MIR6816-201ENST00000620368 66 ntBASIC16.24■□□□□ 0.19
TNNI2P48788 AC010531.8-201ENST00000623341 685 ntBASIC16.24■□□□□ 0.19
TNNI2P48788 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.24■□□□□ 0.19
TNNI2P48788 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC16.24■□□□□ 0.19
TNNI2P48788 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TNNI2P48788 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNNI2P48788 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TNNI2P48788 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TNNI2P48788 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TNNI2P48788 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.23■□□□□ 0.19
TNNI2P48788 AC245140.2-201ENST00000624054 1939 ntBASIC16.23■□□□□ 0.19
TNNI2P48788 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.23■□□□□ 0.19
TNNI2P48788 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TNNI2P48788 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TNNI2P48788 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
TNNI2P48788 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC16.23■□□□□ 0.19
TNNI2P48788 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC16.23■□□□□ 0.19
TNNI2P48788 PGK1P2-201ENST00000431702 1214 ntBASIC16.23■□□□□ 0.19
TNNI2P48788 AK2P2-201ENST00000439142 405 ntBASIC16.23■□□□□ 0.19
TNNI2P48788 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC16.23■□□□□ 0.19
TNNI2P48788 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC16.23■□□□□ 0.19
TNNI2P48788 HNRNPA3P6-201ENST00000472163 1006 ntBASIC16.23■□□□□ 0.19
TNNI2P48788 AC147876.1-201ENST00000504408 322 ntBASIC16.23■□□□□ 0.19
TNNI2P48788 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
TNNI2P48788 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC16.23■□□□□ 0.19
TNNI2P48788 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TNNI2P48788 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TNNI2P48788 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.23■□□□□ 0.19
TNNI2P48788 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.23■□□□□ 0.19
TNNI2P48788 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNNI2P48788 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.23■□□□□ 0.19
TNNI2P48788 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.23■□□□□ 0.19
TNNI2P48788 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNNI2P48788 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNNI2P48788 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNNI2P48788 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.22■□□□□ 0.19
TNNI2P48788 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNNI2P48788 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.22■□□□□ 0.19
TNNI2P48788 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNNI2P48788 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.22■□□□□ 0.19
TNNI2P48788 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNNI2P48788 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNNI2P48788 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNNI2P48788 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNNI2P48788 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TNNI2P48788 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TNNI2P48788 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNNI2P48788 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TNNI2P48788 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNNI2P48788 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNNI2P48788 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNNI2P48788 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC16.22■□□□□ 0.19
TNNI2P48788 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC16.22■□□□□ 0.19
TNNI2P48788 SDCBP2P1-201ENST00000416115 614 ntBASIC16.22■□□□□ 0.19
TNNI2P48788 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms