Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
COL15A1P39059 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COL15A1P39059 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COL15A1P39059 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC17.09■□□□□ 0.33
COL15A1P39059 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC17.09■□□□□ 0.33
COL15A1P39059 TUBB2BP1-201ENST00000404155 871 ntBASIC17.09■□□□□ 0.33
COL15A1P39059 RBMXP1-201ENST00000408004 1191 ntBASIC17.09■□□□□ 0.33
COL15A1P39059 HNRNPA1P25-201ENST00000422644 937 ntBASIC17.09■□□□□ 0.33
COL15A1P39059 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 B9D1-206ENST00000461069 923 ntTSL 2 BASIC17.09■□□□□ 0.33
COL15A1P39059 AK2-208ENST00000487289 920 ntTSL 2 BASIC17.09■□□□□ 0.33
COL15A1P39059 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC17.09■□□□□ 0.33
COL15A1P39059 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC17.09■□□□□ 0.33
COL15A1P39059 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC17.09■□□□□ 0.33
COL15A1P39059 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC17.09■□□□□ 0.33
COL15A1P39059 Z82244.1-201ENST00000631502 840 ntBASIC17.09■□□□□ 0.33
COL15A1P39059 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COL15A1P39059 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
COL15A1P39059 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
COL15A1P39059 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL15A1P39059 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
COL15A1P39059 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL15A1P39059 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
COL15A1P39059 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL15A1P39059 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.08■□□□□ 0.33
COL15A1P39059 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
COL15A1P39059 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
COL15A1P39059 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
COL15A1P39059 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL15A1P39059 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL15A1P39059 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL15A1P39059 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
COL15A1P39059 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL15A1P39059 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC17.08■□□□□ 0.33
COL15A1P39059 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC17.08■□□□□ 0.33
COL15A1P39059 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL15A1P39059 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL15A1P39059 ASS1P1-201ENST00000402854 1237 ntBASIC17.08■□□□□ 0.32
COL15A1P39059 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC17.08■□□□□ 0.32
COL15A1P39059 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL15A1P39059 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC17.08■□□□□ 0.32
COL15A1P39059 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC17.08■□□□□ 0.32
COL15A1P39059 AP001102.1-201ENST00000528959 409 ntBASIC17.08■□□□□ 0.32
COL15A1P39059 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL15A1P39059 RPS5-205ENST00000598495 800 ntTSL 3 BASIC17.08■□□□□ 0.32
COL15A1P39059 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC17.08■□□□□ 0.32
COL15A1P39059 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC17.08■□□□□ 0.32
COL15A1P39059 AC233280.19-201ENST00000633223 136 ntBASIC17.08■□□□□ 0.32
COL15A1P39059 AC138627.1-201ENST00000641127 1257 ntBASIC17.08■□□□□ 0.32
COL15A1P39059 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
COL15A1P39059 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL15A1P39059 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC17.08■□□□□ 0.32
COL15A1P39059 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL15A1P39059 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL15A1P39059 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
COL15A1P39059 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
COL15A1P39059 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.08■□□□□ 0.32
COL15A1P39059 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.08■□□□□ 0.32
COL15A1P39059 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL15A1P39059 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL15A1P39059 NME1-209ENST00000511355 1645 ntTSL 5 BASIC17.08■□□□□ 0.32
COL15A1P39059 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.08■□□□□ 0.32
COL15A1P39059 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COL15A1P39059 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC17.07■□□□□ 0.32
COL15A1P39059 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC17.07■□□□□ 0.32
COL15A1P39059 SFPQP1-201ENST00000446621 1786 ntBASIC17.07■□□□□ 0.32
COL15A1P39059 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL15A1P39059 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC17.07■□□□□ 0.32
COL15A1P39059 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC17.07■□□□□ 0.32
COL15A1P39059 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC17.07■□□□□ 0.32
COL15A1P39059 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC17.07■□□□□ 0.32
COL15A1P39059 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC17.07■□□□□ 0.32
COL15A1P39059 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC17.07■□□□□ 0.32
COL15A1P39059 OR4C14P-201ENST00000440929 923 ntBASIC17.07■□□□□ 0.32
COL15A1P39059 RPSAP16-201ENST00000447583 821 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms