Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC11.59□□□□□ -0.55
CD74P04233 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC11.59□□□□□ -0.55
CD74P04233 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 AC100850.1-201ENST00000506768 649 ntBASIC11.59□□□□□ -0.55
CD74P04233 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.59□□□□□ -0.55
CD74P04233 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.59□□□□□ -0.55
CD74P04233 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.59□□□□□ -0.55
CD74P04233 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
CD74P04233 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC11.59□□□□□ -0.55
CD74P04233 SPCS2P1-201ENST00000561636 679 ntBASIC11.59□□□□□ -0.55
CD74P04233 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC11.59□□□□□ -0.55
CD74P04233 AC010503.4-201ENST00000615487 688 ntBASIC11.59□□□□□ -0.55
CD74P04233 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.59□□□□□ -0.55
CD74P04233 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11.59□□□□□ -0.55
CD74P04233 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CD74P04233 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
CD74P04233 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC11.59□□□□□ -0.55
CD74P04233 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.59□□□□□ -0.55
CD74P04233 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.59□□□□□ -0.55
CD74P04233 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 AC126564.1-201ENST00000623628 2013 ntBASIC11.59□□□□□ -0.55
CD74P04233 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC11.58□□□□□ -0.55
CD74P04233 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
CD74P04233 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.58□□□□□ -0.56
CD74P04233 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC11.58□□□□□ -0.56
CD74P04233 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC11.58□□□□□ -0.56
CD74P04233 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC11.58□□□□□ -0.56
CD74P04233 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CD74P04233 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
CD74P04233 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC11.58□□□□□ -0.56
CD74P04233 CNN2P10-201ENST00000443067 918 ntBASIC11.58□□□□□ -0.56
CD74P04233 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC11.58□□□□□ -0.56
CD74P04233 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 RNA5SP421-201ENST00000516864 134 ntBASIC11.58□□□□□ -0.56
CD74P04233 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC11.58□□□□□ -0.56
CD74P04233 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.58□□□□□ -0.56
CD74P04233 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC11.58□□□□□ -0.56
CD74P04233 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.58□□□□□ -0.56
CD74P04233 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
CD74P04233 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC11.58□□□□□ -0.56
CD74P04233 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
CD74P04233 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CD74P04233 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC11.58□□□□□ -0.56
CD74P04233 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC11.58□□□□□ -0.56
CD74P04233 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC11.58□□□□□ -0.56
CD74P04233 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 AC138761.6-201ENST00000583997 1423 ntBASIC11.58□□□□□ -0.56
CD74P04233 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 AC040160.2-201ENST00000623816 1675 ntBASIC11.58□□□□□ -0.56
CD74P04233 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CD74P04233 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.58□□□□□ -0.56
CD74P04233 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC11.58□□□□□ -0.56
CD74P04233 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD74P04233 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms