Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
CLDN5O00501 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 AC073548.1-201ENST00000624088 1882 ntBASIC14.46□□□□□ -0.09
CLDN5O00501 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN5O00501 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN5O00501 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CLDN5O00501 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN5O00501 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN5O00501 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN5O00501 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN5O00501 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLDN5O00501 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN5O00501 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN5O00501 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 RN7SL351P-201ENST00000469306 248 ntBASIC14.46□□□□□ -0.09
CLDN5O00501 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC14.46□□□□□ -0.09
CLDN5O00501 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 SAA2-206ENST00000530400 323 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN5O00501 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN5O00501 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.46□□□□□ -0.09
CLDN5O00501 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN5O00501 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN5O00501 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN5O00501 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN5O00501 AC006158.1-201ENST00000610661 249 ntBASIC14.46□□□□□ -0.09
CLDN5O00501 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN5O00501 AL451007.2-201ENST00000632004 563 ntBASIC14.46□□□□□ -0.09
CLDN5O00501 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
CLDN5O00501 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CLDN5O00501 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLDN5O00501 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN5O00501 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.1
CLDN5O00501 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN5O00501 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN5O00501 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CLDN5O00501 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN5O00501 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.1
CLDN5O00501 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.46□□□□□ -0.1
CLDN5O00501 AL358781.1-202ENST00000321081 1360 ntBASIC14.46□□□□□ -0.1
CLDN5O00501 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN5O00501 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN5O00501 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN5O00501 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN5O00501 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CLDN5O00501 PTENP1-202ENST00000532280 3996 ntBASIC14.45□□□□□ -0.1
CLDN5O00501 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN5O00501 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLDN5O00501 AC024075.2-201ENST00000598112 1473 ntBASIC14.45□□□□□ -0.1
CLDN5O00501 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLDN5O00501 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN5O00501 PI4KAP2-201ENST00000360806 2080 ntBASIC14.45□□□□□ -0.1
CLDN5O00501 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN5O00501 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN5O00501 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN5O00501 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN5O00501 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN5O00501 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN5O00501 SNU13-204ENST00000402458 462 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN5O00501 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLDN5O00501 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN5O00501 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN5O00501 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN5O00501 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN5O00501 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN5O00501 AC008026.2-201ENST00000495438 348 ntBASIC14.45□□□□□ -0.1
CLDN5O00501 PIGCP1-201ENST00000527583 895 ntBASIC14.45□□□□□ -0.1
CLDN5O00501 BAK1P2-201ENST00000532665 631 ntBASIC14.45□□□□□ -0.1
CLDN5O00501 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CLDN5O00501 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN5O00501 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN5O00501 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CLDN5O00501 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN5O00501 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLDN5O00501 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN5O00501 AC026120.2-201ENST00000617239 309 ntBASIC14.45□□□□□ -0.1
CLDN5O00501 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN5O00501 AC007336.3-201ENST00000623886 2160 ntBASIC14.45□□□□□ -0.1
CLDN5O00501 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN5O00501 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CLDN5O00501 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
CLDN5O00501 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN5O00501 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN5O00501 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN5O00501 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms