Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB13Q9Y5F0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHB13Q9Y5F0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHB13Q9Y5F0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB13Q9Y5F0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.61■■□□□ 1.53
PCDHB13Q9Y5F0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB13Q9Y5F0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.61■■□□□ 1.53
PCDHB13Q9Y5F0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHB13Q9Y5F0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB13Q9Y5F0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB13Q9Y5F0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB13Q9Y5F0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB13Q9Y5F0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB13Q9Y5F0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB13Q9Y5F0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB13Q9Y5F0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.6■■□□□ 1.53
PCDHB13Q9Y5F0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHB13Q9Y5F0 AC241377.3-202ENST00000626088 1088 ntBASIC24.6■■□□□ 1.53
PCDHB13Q9Y5F0 AC241585.3-202ENST00000628937 1088 ntBASIC24.6■■□□□ 1.53
PCDHB13Q9Y5F0 AC245100.8-202ENST00000629247 1058 ntBASIC24.6■■□□□ 1.53
PCDHB13Q9Y5F0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB13Q9Y5F0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB13Q9Y5F0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB13Q9Y5F0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
PCDHB13Q9Y5F0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHB13Q9Y5F0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHB13Q9Y5F0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHB13Q9Y5F0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHB13Q9Y5F0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHB13Q9Y5F0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHB13Q9Y5F0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
PCDHB13Q9Y5F0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
PCDHB13Q9Y5F0 SRD5A1P1-201ENST00000442297 786 ntBASIC24.58■■□□□ 1.53
PCDHB13Q9Y5F0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.58■■□□□ 1.53
PCDHB13Q9Y5F0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHB13Q9Y5F0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.58■■□□□ 1.53
PCDHB13Q9Y5F0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHB13Q9Y5F0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
PCDHB13Q9Y5F0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.58■■□□□ 1.52
PCDHB13Q9Y5F0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB13Q9Y5F0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
PCDHB13Q9Y5F0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.57■■□□□ 1.52
PCDHB13Q9Y5F0 AC131281.2-201ENST00000520478 145 ntBASIC24.57■■□□□ 1.52
PCDHB13Q9Y5F0 MIR4466-201ENST00000606121 54 ntBASIC24.57■■□□□ 1.52
PCDHB13Q9Y5F0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHB13Q9Y5F0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHB13Q9Y5F0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
PCDHB13Q9Y5F0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHB13Q9Y5F0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHB13Q9Y5F0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
PCDHB13Q9Y5F0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHB13Q9Y5F0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHB13Q9Y5F0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHB13Q9Y5F0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHB13Q9Y5F0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHB13Q9Y5F0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHB13Q9Y5F0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHB13Q9Y5F0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHB13Q9Y5F0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHB13Q9Y5F0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHB13Q9Y5F0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
PCDHB13Q9Y5F0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
PCDHB13Q9Y5F0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHB13Q9Y5F0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.54■■□□□ 1.52
PCDHB13Q9Y5F0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHB13Q9Y5F0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHB13Q9Y5F0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHB13Q9Y5F0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.54■■□□□ 1.52
PCDHB13Q9Y5F0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHB13Q9Y5F0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.54■■□□□ 1.52
PCDHB13Q9Y5F0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHB13Q9Y5F0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.53■■□□□ 1.52
PCDHB13Q9Y5F0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHB13Q9Y5F0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHB13Q9Y5F0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHB13Q9Y5F0 AC099791.2-201ENST00000605725 427 ntBASIC24.52■■□□□ 1.52
PCDHB13Q9Y5F0 AC092171.4-201ENST00000609130 632 ntBASIC24.52■■□□□ 1.52
PCDHB13Q9Y5F0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHB13Q9Y5F0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms