Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB9Q9Y5E1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB9Q9Y5E1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB9Q9Y5E1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB9Q9Y5E1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHB9Q9Y5E1 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHB9Q9Y5E1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB9Q9Y5E1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB9Q9Y5E1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB9Q9Y5E1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB9Q9Y5E1 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHB9Q9Y5E1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PCDHB9Q9Y5E1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB9Q9Y5E1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.65■■□□□ 1.22
PCDHB9Q9Y5E1 AP001330.3-201ENST00000520123 633 ntBASIC22.65■■□□□ 1.22
PCDHB9Q9Y5E1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHB9Q9Y5E1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHB9Q9Y5E1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDHB9Q9Y5E1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB9Q9Y5E1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDHB9Q9Y5E1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.64■■□□□ 1.22
PCDHB9Q9Y5E1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHB9Q9Y5E1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB9Q9Y5E1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDHB9Q9Y5E1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDHB9Q9Y5E1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB9Q9Y5E1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHB9Q9Y5E1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB9Q9Y5E1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB9Q9Y5E1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB9Q9Y5E1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB9Q9Y5E1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
PCDHB9Q9Y5E1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
PCDHB9Q9Y5E1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB9Q9Y5E1 AC079630.1-202ENST00000618127 1840 ntBASIC22.62■■□□□ 1.21
PCDHB9Q9Y5E1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB9Q9Y5E1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB9Q9Y5E1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PCDHB9Q9Y5E1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB9Q9Y5E1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDHB9Q9Y5E1 AL162430.1-201ENST00000480705 870 ntBASIC22.62■■□□□ 1.21
PCDHB9Q9Y5E1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB9Q9Y5E1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB9Q9Y5E1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB9Q9Y5E1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDHB9Q9Y5E1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDHB9Q9Y5E1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB9Q9Y5E1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB9Q9Y5E1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHB9Q9Y5E1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB9Q9Y5E1 AC099791.2-201ENST00000605725 427 ntBASIC22.61■■□□□ 1.21
PCDHB9Q9Y5E1 AC087623.3-201ENST00000607047 1098 ntBASIC22.61■■□□□ 1.21
PCDHB9Q9Y5E1 ANOS2P-203ENST00000472227 1816 ntBASIC22.61■■□□□ 1.21
PCDHB9Q9Y5E1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PCDHB9Q9Y5E1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB9Q9Y5E1 AC144652.1-201ENST00000609974 1624 ntBASIC22.6■■□□□ 1.21
PCDHB9Q9Y5E1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB9Q9Y5E1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB9Q9Y5E1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.6■■□□□ 1.21
PCDHB9Q9Y5E1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB9Q9Y5E1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB9Q9Y5E1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB9Q9Y5E1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDHB9Q9Y5E1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB9Q9Y5E1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDHB9Q9Y5E1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHB9Q9Y5E1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB9Q9Y5E1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PCDHB9Q9Y5E1 MIR4767-201ENST00000582827 78 ntBASIC22.59■■□□□ 1.21
PCDHB9Q9Y5E1 AC241377.3-202ENST00000626088 1088 ntBASIC22.59■■□□□ 1.21
PCDHB9Q9Y5E1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB9Q9Y5E1 AC241585.3-202ENST00000628937 1088 ntBASIC22.59■■□□□ 1.21
PCDHB9Q9Y5E1 AC245100.8-202ENST00000629247 1058 ntBASIC22.59■■□□□ 1.21
PCDHB9Q9Y5E1 RASA4CP-201ENST00000424092 1398 ntBASIC22.59■■□□□ 1.21
PCDHB9Q9Y5E1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB9Q9Y5E1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHB9Q9Y5E1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB9Q9Y5E1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHB9Q9Y5E1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.58■■□□□ 1.21
PCDHB9Q9Y5E1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHB9Q9Y5E1 CA15P2-201ENST00000611168 834 ntBASIC22.58■■□□□ 1.21
PCDHB9Q9Y5E1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHB9Q9Y5E1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHB9Q9Y5E1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB9Q9Y5E1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHB9Q9Y5E1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB9Q9Y5E1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB9Q9Y5E1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB9Q9Y5E1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB9Q9Y5E1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHB9Q9Y5E1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB9Q9Y5E1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB9Q9Y5E1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB9Q9Y5E1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB9Q9Y5E1 FP325331.1-202ENST00000623531 1380 ntBASIC22.56■■□□□ 1.2
PCDHB9Q9Y5E1 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.56■■□□□ 1.2
PCDHB9Q9Y5E1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB9Q9Y5E1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB9Q9Y5E1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB9Q9Y5E1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms