Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCL1Q9Y2P8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCL1Q9Y2P8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCL1Q9Y2P8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RCL1Q9Y2P8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
RCL1Q9Y2P8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
RCL1Q9Y2P8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RCL1Q9Y2P8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RCL1Q9Y2P8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RCL1Q9Y2P8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.21■□□□□ 0.51
RCL1Q9Y2P8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RCL1Q9Y2P8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.21■□□□□ 0.51
RCL1Q9Y2P8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.21■□□□□ 0.51
RCL1Q9Y2P8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.21■□□□□ 0.5
RCL1Q9Y2P8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.21■□□□□ 0.5
RCL1Q9Y2P8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RCL1Q9Y2P8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RCL1Q9Y2P8 ALDH1A3-203ENST00000557963 1670 ntBASIC18.2■□□□□ 0.5
RCL1Q9Y2P8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RCL1Q9Y2P8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
RCL1Q9Y2P8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.2■□□□□ 0.5
RCL1Q9Y2P8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.2■□□□□ 0.5
RCL1Q9Y2P8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RCL1Q9Y2P8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RCL1Q9Y2P8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RCL1Q9Y2P8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RCL1Q9Y2P8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 FBXW4P1-201ENST00000426721 2239 ntBASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.19■□□□□ 0.5
RCL1Q9Y2P8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCL1Q9Y2P8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
RCL1Q9Y2P8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
RCL1Q9Y2P8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RCL1Q9Y2P8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RCL1Q9Y2P8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCL1Q9Y2P8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCL1Q9Y2P8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.17■□□□□ 0.5
RCL1Q9Y2P8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RCL1Q9Y2P8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.17■□□□□ 0.5
RCL1Q9Y2P8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCL1Q9Y2P8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
RCL1Q9Y2P8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCL1Q9Y2P8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCL1Q9Y2P8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 AC079630.1-202ENST00000618127 1840 ntBASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.16■□□□□ 0.5
RCL1Q9Y2P8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCL1Q9Y2P8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RCL1Q9Y2P8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms