Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC27.33■■□□□ 1.97
ZC3H4Q9UPT8 AC010525.1-201ENST00000585559 441 ntBASIC27.33■■□□□ 1.97
ZC3H4Q9UPT8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC27.33■■□□□ 1.97
ZC3H4Q9UPT8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZC3H4Q9UPT8 AC004854.2-201ENST00000608450 1441 ntBASIC27.33■■□□□ 1.97
ZC3H4Q9UPT8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZC3H4Q9UPT8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZC3H4Q9UPT8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ZC3H4Q9UPT8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZC3H4Q9UPT8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZC3H4Q9UPT8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZC3H4Q9UPT8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC27.32■■□□□ 1.96
ZC3H4Q9UPT8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
ZC3H4Q9UPT8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ZC3H4Q9UPT8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZC3H4Q9UPT8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ZC3H4Q9UPT8 MIR6089-201ENST00000616698 64 ntBASIC27.32■■□□□ 1.96
ZC3H4Q9UPT8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC27.32■■□□□ 1.96
ZC3H4Q9UPT8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZC3H4Q9UPT8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
ZC3H4Q9UPT8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ZC3H4Q9UPT8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ZC3H4Q9UPT8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ZC3H4Q9UPT8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ZC3H4Q9UPT8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC27.31■■□□□ 1.96
ZC3H4Q9UPT8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ZC3H4Q9UPT8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ZC3H4Q9UPT8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ZC3H4Q9UPT8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC27.3■■□□□ 1.96
ZC3H4Q9UPT8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ZC3H4Q9UPT8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ZC3H4Q9UPT8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ZC3H4Q9UPT8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC27.3■■□□□ 1.96
ZC3H4Q9UPT8 AC093827.2-201ENST00000512654 315 ntBASIC27.3■■□□□ 1.96
ZC3H4Q9UPT8 AC011767.1-201ENST00000617410 1153 ntBASIC27.3■■□□□ 1.96
ZC3H4Q9UPT8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ZC3H4Q9UPT8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
ZC3H4Q9UPT8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC27.3■■□□□ 1.96
ZC3H4Q9UPT8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
ZC3H4Q9UPT8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC27.3■■□□□ 1.96
ZC3H4Q9UPT8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.29■■□□□ 1.96
ZC3H4Q9UPT8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ZC3H4Q9UPT8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ZC3H4Q9UPT8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC27.29■■□□□ 1.96
ZC3H4Q9UPT8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC27.29■■□□□ 1.96
ZC3H4Q9UPT8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
ZC3H4Q9UPT8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
ZC3H4Q9UPT8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
ZC3H4Q9UPT8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC27.28■■□□□ 1.96
ZC3H4Q9UPT8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZC3H4Q9UPT8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
ZC3H4Q9UPT8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ZC3H4Q9UPT8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ZC3H4Q9UPT8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZC3H4Q9UPT8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZC3H4Q9UPT8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZC3H4Q9UPT8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ZC3H4Q9UPT8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ZC3H4Q9UPT8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.96
ZC3H4Q9UPT8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC27.26■■□□□ 1.95
ZC3H4Q9UPT8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
ZC3H4Q9UPT8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
ZC3H4Q9UPT8 AL121832.2-201ENST00000610979 668 ntBASIC27.26■■□□□ 1.95
ZC3H4Q9UPT8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC27.26■■□□□ 1.95
ZC3H4Q9UPT8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ZC3H4Q9UPT8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
ZC3H4Q9UPT8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
ZC3H4Q9UPT8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
ZC3H4Q9UPT8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC27.26■■□□□ 1.95
ZC3H4Q9UPT8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
ZC3H4Q9UPT8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ZC3H4Q9UPT8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZC3H4Q9UPT8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ZC3H4Q9UPT8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC27.25■■□□□ 1.95
ZC3H4Q9UPT8 ERN1-208ENST00000606895 2068 ntBASIC27.25■■□□□ 1.95
ZC3H4Q9UPT8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
ZC3H4Q9UPT8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC27.25■■□□□ 1.95
ZC3H4Q9UPT8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ZC3H4Q9UPT8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC27.25■■□□□ 1.95
ZC3H4Q9UPT8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC27.25■■□□□ 1.95
ZC3H4Q9UPT8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZC3H4Q9UPT8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ZC3H4Q9UPT8 AC010501.1-201ENST00000606270 1962 ntBASIC27.25■■□□□ 1.95
ZC3H4Q9UPT8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZC3H4Q9UPT8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZC3H4Q9UPT8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms