Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPS3Q9UNS2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPS3Q9UNS2 AL353803.4-201ENST00000565882 1934 ntBASIC19.83■□□□□ 0.77
COPS3Q9UNS2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
COPS3Q9UNS2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.83■□□□□ 0.77
COPS3Q9UNS2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.83■□□□□ 0.77
COPS3Q9UNS2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPS3Q9UNS2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COPS3Q9UNS2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.83■□□□□ 0.76
COPS3Q9UNS2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COPS3Q9UNS2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COPS3Q9UNS2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.82■□□□□ 0.76
COPS3Q9UNS2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPS3Q9UNS2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPS3Q9UNS2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.82■□□□□ 0.76
COPS3Q9UNS2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COPS3Q9UNS2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.82■□□□□ 0.76
COPS3Q9UNS2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COPS3Q9UNS2 AC127496.7-201ENST00000625110 1798 ntBASIC19.82■□□□□ 0.76
COPS3Q9UNS2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.82■□□□□ 0.76
COPS3Q9UNS2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPS3Q9UNS2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.82■□□□□ 0.76
COPS3Q9UNS2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COPS3Q9UNS2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPS3Q9UNS2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPS3Q9UNS2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPS3Q9UNS2 ESRRAP2-201ENST00000418437 1549 ntBASIC19.81■□□□□ 0.76
COPS3Q9UNS2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS3Q9UNS2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS3Q9UNS2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COPS3Q9UNS2 AC074183.2-201ENST00000623112 922 ntBASIC19.81■□□□□ 0.76
COPS3Q9UNS2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
COPS3Q9UNS2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COPS3Q9UNS2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS3Q9UNS2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS3Q9UNS2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
COPS3Q9UNS2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS3Q9UNS2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COPS3Q9UNS2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.81■□□□□ 0.76
COPS3Q9UNS2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COPS3Q9UNS2 AC242852.2-201ENST00000615738 1807 ntBASIC19.81■□□□□ 0.76
COPS3Q9UNS2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
COPS3Q9UNS2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COPS3Q9UNS2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
COPS3Q9UNS2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS3Q9UNS2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPS3Q9UNS2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COPS3Q9UNS2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COPS3Q9UNS2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.78■□□□□ 0.76
COPS3Q9UNS2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPS3Q9UNS2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.78■□□□□ 0.76
COPS3Q9UNS2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COPS3Q9UNS2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.78■□□□□ 0.76
COPS3Q9UNS2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPS3Q9UNS2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPS3Q9UNS2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPS3Q9UNS2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COPS3Q9UNS2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
COPS3Q9UNS2 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.77■□□□□ 0.76
COPS3Q9UNS2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COPS3Q9UNS2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPS3Q9UNS2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.77■□□□□ 0.76
COPS3Q9UNS2 TSPY13P-201ENST00000338964 914 ntBASIC19.77■□□□□ 0.76
COPS3Q9UNS2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.77■□□□□ 0.76
COPS3Q9UNS2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.77■□□□□ 0.76
COPS3Q9UNS2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.77■□□□□ 0.76
COPS3Q9UNS2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPS3Q9UNS2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms