Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HINT3Q9NQE9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HINT3Q9NQE9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HINT3Q9NQE9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HINT3Q9NQE9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.14■□□□□ 0.81
HINT3Q9NQE9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.14■□□□□ 0.81
HINT3Q9NQE9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HINT3Q9NQE9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
HINT3Q9NQE9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HINT3Q9NQE9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HINT3Q9NQE9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
HINT3Q9NQE9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.13■□□□□ 0.81
HINT3Q9NQE9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HINT3Q9NQE9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.13■□□□□ 0.81
HINT3Q9NQE9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.13■□□□□ 0.81
HINT3Q9NQE9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.13■□□□□ 0.81
HINT3Q9NQE9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HINT3Q9NQE9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.13■□□□□ 0.81
HINT3Q9NQE9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.13■□□□□ 0.81
HINT3Q9NQE9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.13■□□□□ 0.81
HINT3Q9NQE9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.13■□□□□ 0.81
HINT3Q9NQE9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HINT3Q9NQE9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
HINT3Q9NQE9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
HINT3Q9NQE9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.12■□□□□ 0.81
HINT3Q9NQE9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HINT3Q9NQE9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
HINT3Q9NQE9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HINT3Q9NQE9 KRT18P24-201ENST00000344739 1156 ntBASIC20.12■□□□□ 0.81
HINT3Q9NQE9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.12■□□□□ 0.81
HINT3Q9NQE9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HINT3Q9NQE9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HINT3Q9NQE9 THA1P-201ENST00000590384 1145 ntBASIC20.12■□□□□ 0.81
HINT3Q9NQE9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HINT3Q9NQE9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
HINT3Q9NQE9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HINT3Q9NQE9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HINT3Q9NQE9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HINT3Q9NQE9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.11■□□□□ 0.81
HINT3Q9NQE9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HINT3Q9NQE9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
HINT3Q9NQE9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HINT3Q9NQE9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HINT3Q9NQE9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HINT3Q9NQE9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HINT3Q9NQE9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.11■□□□□ 0.81
HINT3Q9NQE9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
HINT3Q9NQE9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HINT3Q9NQE9 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.11■□□□□ 0.81
HINT3Q9NQE9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 MIR4281-201ENST00000580852 62 ntBASIC20.1■□□□□ 0.81
HINT3Q9NQE9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 AL035685.1-201ENST00000636663 812 ntBASIC20.1■□□□□ 0.81
HINT3Q9NQE9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HINT3Q9NQE9 AL353803.4-201ENST00000565882 1934 ntBASIC20.1■□□□□ 0.81
HINT3Q9NQE9 AC137767.1-201ENST00000602918 1920 ntBASIC20.1■□□□□ 0.81
HINT3Q9NQE9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HINT3Q9NQE9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HINT3Q9NQE9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HINT3Q9NQE9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.09■□□□□ 0.81
HINT3Q9NQE9 AC004448.1-201ENST00000458332 883 ntBASIC20.09■□□□□ 0.81
HINT3Q9NQE9 AC009299.2-201ENST00000482477 511 ntBASIC20.09■□□□□ 0.81
HINT3Q9NQE9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.09■□□□□ 0.81
HINT3Q9NQE9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HINT3Q9NQE9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HINT3Q9NQE9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.09■□□□□ 0.81
HINT3Q9NQE9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
HINT3Q9NQE9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HINT3Q9NQE9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HINT3Q9NQE9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
HINT3Q9NQE9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HINT3Q9NQE9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.08■□□□□ 0.81
HINT3Q9NQE9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HINT3Q9NQE9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HINT3Q9NQE9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
HINT3Q9NQE9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HINT3Q9NQE9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HINT3Q9NQE9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.08■□□□□ 0.8
HINT3Q9NQE9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HINT3Q9NQE9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HINT3Q9NQE9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HINT3Q9NQE9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HINT3Q9NQE9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.07■□□□□ 0.8
HINT3Q9NQE9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HINT3Q9NQE9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms