Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.81■■□□□ 1.4
SNX25Q9H3E2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.81■■□□□ 1.4
SNX25Q9H3E2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.81■■□□□ 1.4
SNX25Q9H3E2 AC133561.4-201ENST00000566112 224 ntBASIC23.81■■□□□ 1.4
SNX25Q9H3E2 ANOS2P-203ENST00000472227 1816 ntBASIC23.81■■□□□ 1.4
SNX25Q9H3E2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNX25Q9H3E2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.8■■□□□ 1.4
SNX25Q9H3E2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNX25Q9H3E2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.8■■□□□ 1.4
SNX25Q9H3E2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.8■■□□□ 1.4
SNX25Q9H3E2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.8■■□□□ 1.4
SNX25Q9H3E2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.8■■□□□ 1.4
SNX25Q9H3E2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SNX25Q9H3E2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.8■■□□□ 1.4
SNX25Q9H3E2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNX25Q9H3E2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.79■■□□□ 1.4
SNX25Q9H3E2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SNX25Q9H3E2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.79■■□□□ 1.4
SNX25Q9H3E2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.79■■□□□ 1.4
SNX25Q9H3E2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.79■■□□□ 1.4
SNX25Q9H3E2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNX25Q9H3E2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNX25Q9H3E2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.79■■□□□ 1.4
SNX25Q9H3E2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.79■■□□□ 1.4
SNX25Q9H3E2 MIR4767-201ENST00000582827 78 ntBASIC23.79■■□□□ 1.4
SNX25Q9H3E2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SNX25Q9H3E2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.79■■□□□ 1.4
SNX25Q9H3E2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNX25Q9H3E2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.79■■□□□ 1.4
SNX25Q9H3E2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SNX25Q9H3E2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.78■■□□□ 1.4
SNX25Q9H3E2 AC005837.3-201ENST00000612163 286 ntBASIC23.78■■□□□ 1.4
SNX25Q9H3E2 AC136469.2-201ENST00000623944 1028 ntBASIC23.78■■□□□ 1.4
SNX25Q9H3E2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.78■■□□□ 1.4
SNX25Q9H3E2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNX25Q9H3E2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNX25Q9H3E2 AL353803.4-201ENST00000565882 1934 ntBASIC23.78■■□□□ 1.4
SNX25Q9H3E2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SNX25Q9H3E2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.77■■□□□ 1.4
SNX25Q9H3E2 AL499627.2-201ENST00000606283 725 ntBASIC23.77■■□□□ 1.4
SNX25Q9H3E2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SNX25Q9H3E2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX25Q9H3E2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 EDA-201ENST00000338901 1233 ntBASIC23.76■■□□□ 1.39
SNX25Q9H3E2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX25Q9H3E2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SNX25Q9H3E2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
SNX25Q9H3E2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNX25Q9H3E2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNX25Q9H3E2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNX25Q9H3E2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
SNX25Q9H3E2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SNX25Q9H3E2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNX25Q9H3E2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
SNX25Q9H3E2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.75■■□□□ 1.39
SNX25Q9H3E2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.75■■□□□ 1.39
SNX25Q9H3E2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNX25Q9H3E2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.74■■□□□ 1.39
SNX25Q9H3E2 AC133637.1-201ENST00000624115 1537 ntBASIC23.74■■□□□ 1.39
SNX25Q9H3E2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.74■■□□□ 1.39
SNX25Q9H3E2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
SNX25Q9H3E2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SNX25Q9H3E2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SNX25Q9H3E2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SNX25Q9H3E2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SNX25Q9H3E2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SNX25Q9H3E2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SNX25Q9H3E2 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.74■■□□□ 1.39
SNX25Q9H3E2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.74■■□□□ 1.39
SNX25Q9H3E2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.74■■□□□ 1.39
SNX25Q9H3E2 AL355001.2-201ENST00000620617 1191 ntBASIC23.74■■□□□ 1.39
SNX25Q9H3E2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SNX25Q9H3E2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SNX25Q9H3E2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SNX25Q9H3E2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SNX25Q9H3E2 AC092068.2-201ENST00000590491 1708 ntBASIC23.73■■□□□ 1.39
SNX25Q9H3E2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SNX25Q9H3E2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SNX25Q9H3E2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.73■■□□□ 1.39
SNX25Q9H3E2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
SNX25Q9H3E2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.73■■□□□ 1.39
SNX25Q9H3E2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.73■■□□□ 1.39
SNX25Q9H3E2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SNX25Q9H3E2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.73■■□□□ 1.39
SNX25Q9H3E2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SNX25Q9H3E2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SNX25Q9H3E2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms