Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCM2Q9BSQ5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCM2Q9BSQ5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.96■■□□□ 1.11
CCM2Q9BSQ5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.95■■□□□ 1.11
CCM2Q9BSQ5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CCM2Q9BSQ5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.95■■□□□ 1.1
CCM2Q9BSQ5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.95■■□□□ 1.1
CCM2Q9BSQ5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCM2Q9BSQ5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.95■■□□□ 1.1
CCM2Q9BSQ5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.95■■□□□ 1.1
CCM2Q9BSQ5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.95■■□□□ 1.1
CCM2Q9BSQ5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CCM2Q9BSQ5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCM2Q9BSQ5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCM2Q9BSQ5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCM2Q9BSQ5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 AC006455.2-201ENST00000429931 906 ntBASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCM2Q9BSQ5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CCM2Q9BSQ5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.92■■□□□ 1.1
CCM2Q9BSQ5 DUSP8P5-201ENST00000422884 1815 ntBASIC21.92■■□□□ 1.1
CCM2Q9BSQ5 DUSP8P3-201ENST00000399571 1760 ntBASIC21.92■■□□□ 1.1
CCM2Q9BSQ5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCM2Q9BSQ5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCM2Q9BSQ5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.92■■□□□ 1.1
CCM2Q9BSQ5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCM2Q9BSQ5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.92■■□□□ 1.1
CCM2Q9BSQ5 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.92■■□□□ 1.1
CCM2Q9BSQ5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCM2Q9BSQ5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCM2Q9BSQ5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCM2Q9BSQ5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCM2Q9BSQ5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCM2Q9BSQ5 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.91■■□□□ 1.1
CCM2Q9BSQ5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCM2Q9BSQ5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.91■■□□□ 1.1
CCM2Q9BSQ5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.91■■□□□ 1.1
CCM2Q9BSQ5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCM2Q9BSQ5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.91■■□□□ 1.1
CCM2Q9BSQ5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCM2Q9BSQ5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCM2Q9BSQ5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.91■■□□□ 1.1
CCM2Q9BSQ5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCM2Q9BSQ5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.91■■□□□ 1.1
CCM2Q9BSQ5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCM2Q9BSQ5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.9■■□□□ 1.1
CCM2Q9BSQ5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.9■■□□□ 1.1
CCM2Q9BSQ5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCM2Q9BSQ5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.9■■□□□ 1.1
CCM2Q9BSQ5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCM2Q9BSQ5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCM2Q9BSQ5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.9■■□□□ 1.1
CCM2Q9BSQ5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCM2Q9BSQ5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCM2Q9BSQ5 SYT6-210ENST00000641643 1587 ntBASIC21.9■■□□□ 1.1
CCM2Q9BSQ5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCM2Q9BSQ5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCM2Q9BSQ5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCM2Q9BSQ5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.89■■□□□ 1.1
CCM2Q9BSQ5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCM2Q9BSQ5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
CCM2Q9BSQ5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCM2Q9BSQ5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.89■■□□□ 1.09
CCM2Q9BSQ5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.89■■□□□ 1.09
CCM2Q9BSQ5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms