Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MUC4Q99102 AL031848.2-201ENST00000607670 837 ntBASIC16.27■□□□□ 0.19
MUC4Q99102 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
MUC4Q99102 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MUC4Q99102 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MUC4Q99102 LINC00526-201ENST00000581067 1875 ntBASIC16.26■□□□□ 0.19
MUC4Q99102 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MUC4Q99102 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.26■□□□□ 0.19
MUC4Q99102 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MUC4Q99102 BX664725.1-201ENST00000438252 379 ntBASIC16.26■□□□□ 0.19
MUC4Q99102 SNX5-217ENST00000606557 1087 ntBASIC16.26■□□□□ 0.19
MUC4Q99102 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.26■□□□□ 0.19
MUC4Q99102 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MUC4Q99102 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MUC4Q99102 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.26■□□□□ 0.19
MUC4Q99102 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MUC4Q99102 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MUC4Q99102 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MUC4Q99102 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.26■□□□□ 0.19
MUC4Q99102 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MUC4Q99102 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MUC4Q99102 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MUC4Q99102 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MUC4Q99102 Z92544.1-202ENST00000571933 1220 ntBASIC16.26■□□□□ 0.19
MUC4Q99102 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MUC4Q99102 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MUC4Q99102 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MUC4Q99102 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.25■□□□□ 0.19
MUC4Q99102 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MUC4Q99102 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.25■□□□□ 0.19
MUC4Q99102 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MUC4Q99102 AC008406.3-201ENST00000620001 1374 ntBASIC16.25■□□□□ 0.19
MUC4Q99102 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MUC4Q99102 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MUC4Q99102 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
MUC4Q99102 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.24■□□□□ 0.19
MUC4Q99102 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.24■□□□□ 0.19
MUC4Q99102 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MUC4Q99102 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.24■□□□□ 0.19
MUC4Q99102 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
MUC4Q99102 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MUC4Q99102 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
MUC4Q99102 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MUC4Q99102 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MUC4Q99102 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MUC4Q99102 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MUC4Q99102 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
MUC4Q99102 MIR638-201ENST00000385237 100 ntBASIC16.24■□□□□ 0.19
MUC4Q99102 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MUC4Q99102 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.24■□□□□ 0.19
MUC4Q99102 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MUC4Q99102 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MUC4Q99102 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
MUC4Q99102 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
MUC4Q99102 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.23■□□□□ 0.19
MUC4Q99102 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.23■□□□□ 0.19
MUC4Q99102 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MUC4Q99102 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.23■□□□□ 0.19
MUC4Q99102 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
MUC4Q99102 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MUC4Q99102 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MUC4Q99102 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
MUC4Q99102 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MUC4Q99102 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.23■□□□□ 0.19
MUC4Q99102 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MUC4Q99102 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MUC4Q99102 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MUC4Q99102 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
MUC4Q99102 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.23■□□□□ 0.19
MUC4Q99102 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.23■□□□□ 0.19
MUC4Q99102 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.23■□□□□ 0.19
MUC4Q99102 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MUC4Q99102 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.22■□□□□ 0.19
MUC4Q99102 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MUC4Q99102 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.22■□□□□ 0.19
MUC4Q99102 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
MUC4Q99102 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MUC4Q99102 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MUC4Q99102 AC004448.1-201ENST00000458332 883 ntBASIC16.22■□□□□ 0.19
MUC4Q99102 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MUC4Q99102 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MUC4Q99102 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MUC4Q99102 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MUC4Q99102 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.22■□□□□ 0.19
MUC4Q99102 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MUC4Q99102 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MUC4Q99102 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.22■□□□□ 0.19
MUC4Q99102 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MUC4Q99102 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MUC4Q99102 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.21■□□□□ 0.19
MUC4Q99102 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MUC4Q99102 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.21■□□□□ 0.19
MUC4Q99102 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.21■□□□□ 0.19
MUC4Q99102 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MUC4Q99102 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.21■□□□□ 0.19
MUC4Q99102 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.21■□□□□ 0.19
MUC4Q99102 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MUC4Q99102 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.21■□□□□ 0.19
MUC4Q99102 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
MUC4Q99102 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms