Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB18PQ96TA0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PCDHB18PQ96TA0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB18PQ96TA0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB18PQ96TA0 AC009102.2-201ENST00000606772 1639 ntBASIC23.73■■□□□ 1.39
PCDHB18PQ96TA0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
PCDHB18PQ96TA0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.73■■□□□ 1.39
PCDHB18PQ96TA0 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.73■■□□□ 1.39
PCDHB18PQ96TA0 AL035685.1-201ENST00000636663 812 ntBASIC23.73■■□□□ 1.39
PCDHB18PQ96TA0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHB18PQ96TA0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB18PQ96TA0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PCDHB18PQ96TA0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB18PQ96TA0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB18PQ96TA0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.72■■□□□ 1.39
PCDHB18PQ96TA0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB18PQ96TA0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB18PQ96TA0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
PCDHB18PQ96TA0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB18PQ96TA0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PCDHB18PQ96TA0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHB18PQ96TA0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB18PQ96TA0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PCDHB18PQ96TA0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB18PQ96TA0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB18PQ96TA0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB18PQ96TA0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB18PQ96TA0 AL117328.2-201ENST00000624617 1940 ntBASIC23.71■■□□□ 1.39
PCDHB18PQ96TA0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB18PQ96TA0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB18PQ96TA0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB18PQ96TA0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PCDHB18PQ96TA0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHB18PQ96TA0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB18PQ96TA0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHB18PQ96TA0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDHB18PQ96TA0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB18PQ96TA0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB18PQ96TA0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDHB18PQ96TA0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB18PQ96TA0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHB18PQ96TA0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB18PQ96TA0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB18PQ96TA0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHB18PQ96TA0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB18PQ96TA0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB18PQ96TA0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB18PQ96TA0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB18PQ96TA0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
PCDHB18PQ96TA0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB18PQ96TA0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHB18PQ96TA0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHB18PQ96TA0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PCDHB18PQ96TA0 LINC01529-204ENST00000636474 1715 ntBASIC23.68■■□□□ 1.38
PCDHB18PQ96TA0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB18PQ96TA0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB18PQ96TA0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCDHB18PQ96TA0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB18PQ96TA0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB18PQ96TA0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.68■■□□□ 1.38
PCDHB18PQ96TA0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB18PQ96TA0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PCDHB18PQ96TA0 AC079834.2-201ENST00000609776 1949 ntBASIC23.68■■□□□ 1.38
PCDHB18PQ96TA0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB18PQ96TA0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
PCDHB18PQ96TA0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCDHB18PQ96TA0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB18PQ96TA0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB18PQ96TA0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB18PQ96TA0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB18PQ96TA0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB18PQ96TA0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
PCDHB18PQ96TA0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.67■■□□□ 1.38
PCDHB18PQ96TA0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB18PQ96TA0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHB18PQ96TA0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB18PQ96TA0 EP400NL-214ENST00000641289 2402 ntBASIC23.67■■□□□ 1.38
PCDHB18PQ96TA0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDHB18PQ96TA0 FP325331.1-202ENST00000623531 1380 ntBASIC23.66■■□□□ 1.38
PCDHB18PQ96TA0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PCDHB18PQ96TA0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB18PQ96TA0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.66■■□□□ 1.38
PCDHB18PQ96TA0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDHB18PQ96TA0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHB18PQ96TA0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB18PQ96TA0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
PCDHB18PQ96TA0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PCDHB18PQ96TA0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB18PQ96TA0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.65■■□□□ 1.38
PCDHB18PQ96TA0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHB18PQ96TA0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHB18PQ96TA0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB18PQ96TA0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB18PQ96TA0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PCDHB18PQ96TA0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PCDHB18PQ96TA0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHB18PQ96TA0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHB18PQ96TA0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHB18PQ96TA0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
PCDHB18PQ96TA0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms