Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CDK5RAP1Q96SZ6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDK5RAP1Q96SZ6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.22■■□□□ 1.31
CDK5RAP1Q96SZ6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.22■■□□□ 1.31
CDK5RAP1Q96SZ6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDK5RAP1Q96SZ6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDK5RAP1Q96SZ6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
CDK5RAP1Q96SZ6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.21■■□□□ 1.31
CDK5RAP1Q96SZ6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.21■■□□□ 1.31
CDK5RAP1Q96SZ6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.21■■□□□ 1.31
CDK5RAP1Q96SZ6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDK5RAP1Q96SZ6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDK5RAP1Q96SZ6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CDK5RAP1Q96SZ6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDK5RAP1Q96SZ6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.21■■□□□ 1.31
CDK5RAP1Q96SZ6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDK5RAP1Q96SZ6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDK5RAP1Q96SZ6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDK5RAP1Q96SZ6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.2■■□□□ 1.3
CDK5RAP1Q96SZ6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.2■■□□□ 1.3
CDK5RAP1Q96SZ6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.2■■□□□ 1.3
CDK5RAP1Q96SZ6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDK5RAP1Q96SZ6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDK5RAP1Q96SZ6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDK5RAP1Q96SZ6 AC008764.7-201ENST00000593779 1081 ntBASIC23.2■■□□□ 1.3
CDK5RAP1Q96SZ6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDK5RAP1Q96SZ6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
CDK5RAP1Q96SZ6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDK5RAP1Q96SZ6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDK5RAP1Q96SZ6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.18■■□□□ 1.3
CDK5RAP1Q96SZ6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CDK5RAP1Q96SZ6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDK5RAP1Q96SZ6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDK5RAP1Q96SZ6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.18■■□□□ 1.3
CDK5RAP1Q96SZ6 AC099791.1-201ENST00000416440 715 ntBASIC23.18■■□□□ 1.3
CDK5RAP1Q96SZ6 CA15P2-201ENST00000611168 834 ntBASIC23.18■■□□□ 1.3
CDK5RAP1Q96SZ6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CDK5RAP1Q96SZ6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDK5RAP1Q96SZ6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.17■■□□□ 1.3
CDK5RAP1Q96SZ6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.17■■□□□ 1.3
CDK5RAP1Q96SZ6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDK5RAP1Q96SZ6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDK5RAP1Q96SZ6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDK5RAP1Q96SZ6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDK5RAP1Q96SZ6 OR2I1P-207ENST00000453522 948 ntBASIC23.17■■□□□ 1.3
CDK5RAP1Q96SZ6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.17■■□□□ 1.3
CDK5RAP1Q96SZ6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.17■■□□□ 1.3
CDK5RAP1Q96SZ6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDK5RAP1Q96SZ6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDK5RAP1Q96SZ6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.17■■□□□ 1.3
CDK5RAP1Q96SZ6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDK5RAP1Q96SZ6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDK5RAP1Q96SZ6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CDK5RAP1Q96SZ6 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.16■■□□□ 1.3
CDK5RAP1Q96SZ6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDK5RAP1Q96SZ6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDK5RAP1Q96SZ6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CDK5RAP1Q96SZ6 AL353803.4-201ENST00000565882 1934 ntBASIC23.16■■□□□ 1.3
CDK5RAP1Q96SZ6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDK5RAP1Q96SZ6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CDK5RAP1Q96SZ6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDK5RAP1Q96SZ6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDK5RAP1Q96SZ6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.15■■□□□ 1.3
CDK5RAP1Q96SZ6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDK5RAP1Q96SZ6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDK5RAP1Q96SZ6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDK5RAP1Q96SZ6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
CDK5RAP1Q96SZ6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.14■■□□□ 1.29
CDK5RAP1Q96SZ6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.14■■□□□ 1.29
CDK5RAP1Q96SZ6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
CDK5RAP1Q96SZ6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDK5RAP1Q96SZ6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CDK5RAP1Q96SZ6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDK5RAP1Q96SZ6 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.14■■□□□ 1.29
CDK5RAP1Q96SZ6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDK5RAP1Q96SZ6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.13■■□□□ 1.29
CDK5RAP1Q96SZ6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CDK5RAP1Q96SZ6 SLC47A1P1-202ENST00000449666 945 ntBASIC23.13■■□□□ 1.29
CDK5RAP1Q96SZ6 AC105265.2-201ENST00000467189 838 ntBASIC23.13■■□□□ 1.29
CDK5RAP1Q96SZ6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDK5RAP1Q96SZ6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.13■■□□□ 1.29
CDK5RAP1Q96SZ6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CDK5RAP1Q96SZ6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.13■■□□□ 1.29
CDK5RAP1Q96SZ6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDK5RAP1Q96SZ6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CDK5RAP1Q96SZ6 AC092068.2-201ENST00000590491 1708 ntBASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms