Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CNTNAP3BQ96NU0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNTNAP3BQ96NU0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNTNAP3BQ96NU0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.4■■□□□ 1.02
CNTNAP3BQ96NU0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.4■■□□□ 1.02
CNTNAP3BQ96NU0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CNTNAP3BQ96NU0 KRT18P11-201ENST00000435214 1283 ntBASIC21.4■■□□□ 1.02
CNTNAP3BQ96NU0 DUX4L4-201ENST00000566884 1269 ntBASIC21.4■■□□□ 1.02
CNTNAP3BQ96NU0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNTNAP3BQ96NU0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CNTNAP3BQ96NU0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.4■■□□□ 1.02
CNTNAP3BQ96NU0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNTNAP3BQ96NU0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CNTNAP3BQ96NU0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CNTNAP3BQ96NU0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CNTNAP3BQ96NU0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CNTNAP3BQ96NU0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CNTNAP3BQ96NU0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNTNAP3BQ96NU0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.39■■□□□ 1.01
CNTNAP3BQ96NU0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.39■■□□□ 1.01
CNTNAP3BQ96NU0 RNA5SP413-201ENST00000516373 109 ntBASIC21.39■■□□□ 1.01
CNTNAP3BQ96NU0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.39■■□□□ 1.01
CNTNAP3BQ96NU0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
CNTNAP3BQ96NU0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CNTNAP3BQ96NU0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNTNAP3BQ96NU0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP3BQ96NU0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP3BQ96NU0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP3BQ96NU0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CNTNAP3BQ96NU0 KRT19P1-201ENST00000405746 1186 ntBASIC21.38■■□□□ 1.01
CNTNAP3BQ96NU0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP3BQ96NU0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.38■■□□□ 1.01
CNTNAP3BQ96NU0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP3BQ96NU0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CNTNAP3BQ96NU0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.38■■□□□ 1.01
CNTNAP3BQ96NU0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.38■■□□□ 1.01
CNTNAP3BQ96NU0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.38■■□□□ 1.01
CNTNAP3BQ96NU0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.38■■□□□ 1.01
CNTNAP3BQ96NU0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CNTNAP3BQ96NU0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
CNTNAP3BQ96NU0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP3BQ96NU0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.37■■□□□ 1.01
CNTNAP3BQ96NU0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP3BQ96NU0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP3BQ96NU0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP3BQ96NU0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP3BQ96NU0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP3BQ96NU0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 AL158047.1-201ENST00000445918 881 ntBASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 AC091060.1-201ENST00000623524 1766 ntBASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP3BQ96NU0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.35■■□□□ 1.01
CNTNAP3BQ96NU0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP3BQ96NU0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CNTNAP3BQ96NU0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP3BQ96NU0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CNTNAP3BQ96NU0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.35■■□□□ 1.01
CNTNAP3BQ96NU0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.35■■□□□ 1.01
CNTNAP3BQ96NU0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.35■■□□□ 1.01
CNTNAP3BQ96NU0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP3BQ96NU0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.34■■□□□ 1.01
CNTNAP3BQ96NU0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
CNTNAP3BQ96NU0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP3BQ96NU0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.34■■□□□ 1.01
CNTNAP3BQ96NU0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CNTNAP3BQ96NU0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CNTNAP3BQ96NU0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP3BQ96NU0 AC073210.2-201ENST00000430369 194 ntBASIC21.34■■□□□ 1.01
CNTNAP3BQ96NU0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP3BQ96NU0 AC098934.4-201ENST00000564127 592 ntBASIC21.34■■□□□ 1.01
CNTNAP3BQ96NU0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP3BQ96NU0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP3BQ96NU0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP3BQ96NU0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP3BQ96NU0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CNTNAP3BQ96NU0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CNTNAP3BQ96NU0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.33■■□□□ 1.01
CNTNAP3BQ96NU0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.33■■□□□ 1.01
CNTNAP3BQ96NU0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CNTNAP3BQ96NU0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CNTNAP3BQ96NU0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CNTNAP3BQ96NU0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms