Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC009102.2-201ENST00000606772 1639 ntBASIC31.28■■■□□ 2.6
CCDC7Q96M83 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC7Q96M83 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC7Q96M83 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC31.28■■■□□ 2.6
CCDC7Q96M83 C9orf163-202ENST00000624034 2573 ntBASIC31.28■■■□□ 2.6
CCDC7Q96M83 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC31.28■■■□□ 2.6
CCDC7Q96M83 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC31.28■■■□□ 2.6
CCDC7Q96M83 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
CCDC7Q96M83 AC068473.5-201ENST00000616428 2072 ntBASIC31.27■■■□□ 2.6
CCDC7Q96M83 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC7Q96M83 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC7Q96M83 UNC93B3-201ENST00000308076 687 ntBASIC31.27■■■□□ 2.6
CCDC7Q96M83 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC7Q96M83 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
CCDC7Q96M83 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
CCDC7Q96M83 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC31.26■■■□□ 2.59
CCDC7Q96M83 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC31.26■■■□□ 2.59
CCDC7Q96M83 AL136162.1-201ENST00000607711 1078 ntBASIC31.26■■■□□ 2.59
CCDC7Q96M83 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC31.26■■■□□ 2.59
CCDC7Q96M83 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC7Q96M83 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC7Q96M83 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC31.25■■■□□ 2.59
CCDC7Q96M83 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC31.25■■■□□ 2.59
CCDC7Q96M83 ASB1-202ENST00000409297 878 ntTSL 5 BASIC31.25■■■□□ 2.59
CCDC7Q96M83 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC31.25■■■□□ 2.59
CCDC7Q96M83 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC7Q96M83 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC7Q96M83 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC7Q96M83 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC7Q96M83 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC31.24■■■□□ 2.59
CCDC7Q96M83 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
CCDC7Q96M83 LTK-203ENST00000453182 2412 ntTSL 2 BASIC31.24■■■□□ 2.59
CCDC7Q96M83 AC144652.1-201ENST00000609974 1624 ntBASIC31.23■■■□□ 2.59
CCDC7Q96M83 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC7Q96M83 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
CCDC7Q96M83 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
CCDC7Q96M83 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.23■■■□□ 2.59
CCDC7Q96M83 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC7Q96M83 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC31.23■■■□□ 2.59
CCDC7Q96M83 AC135279.3-201ENST00000610945 1311 ntBASIC31.23■■■□□ 2.59
CCDC7Q96M83 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC7Q96M83 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC7Q96M83 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC31.22■■■□□ 2.59
CCDC7Q96M83 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC7Q96M83 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC31.22■■■□□ 2.59
CCDC7Q96M83 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC7Q96M83 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC31.22■■■□□ 2.59
CCDC7Q96M83 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC7Q96M83 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC7Q96M83 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC31.21■■■□□ 2.59
CCDC7Q96M83 AC092666.2-201ENST00000613287 246 ntBASIC31.21■■■□□ 2.59
CCDC7Q96M83 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC31.21■■■□□ 2.59
CCDC7Q96M83 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
CCDC7Q96M83 C17orf82-201ENST00000623772 1530 ntBASIC31.2■■■□□ 2.59
CCDC7Q96M83 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
CCDC7Q96M83 EDA-201ENST00000338901 1233 ntBASIC31.2■■■□□ 2.59
CCDC7Q96M83 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC31.2■■■□□ 2.59
CCDC7Q96M83 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
CCDC7Q96M83 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.2■■■□□ 2.59
CCDC7Q96M83 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC31.2■■■□□ 2.59
CCDC7Q96M83 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.58
CCDC7Q96M83 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CCDC7Q96M83 AL353803.4-201ENST00000565882 1934 ntBASIC31.19■■■□□ 2.58
CCDC7Q96M83 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC7Q96M83 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC7Q96M83 LGR4-203ENST00000480977 492 ntTSL 2 BASIC31.19■■■□□ 2.58
CCDC7Q96M83 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC31.19■■■□□ 2.58
CCDC7Q96M83 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC31.19■■■□□ 2.58
CCDC7Q96M83 NKILA-201ENST00000613231 537 ntTSL 4 BASIC31.19■■■□□ 2.58
CCDC7Q96M83 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC7Q96M83 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC7Q96M83 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC7Q96M83 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
CCDC7Q96M83 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
CCDC7Q96M83 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC31.17■■■□□ 2.58
CCDC7Q96M83 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC31.17■■■□□ 2.58
CCDC7Q96M83 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC31.17■■■□□ 2.58
CCDC7Q96M83 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC7Q96M83 SRD5A1P1-201ENST00000442297 786 ntBASIC31.17■■■□□ 2.58
CCDC7Q96M83 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.17■■■□□ 2.58
CCDC7Q96M83 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC7Q96M83 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC7Q96M83 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC7Q96M83 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC7Q96M83 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31.16■■■□□ 2.58
CCDC7Q96M83 AC024257.2-201ENST00000549699 147 ntBASIC31.16■■■□□ 2.58
CCDC7Q96M83 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC7Q96M83 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC7Q96M83 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC7Q96M83 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC7Q96M83 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
CCDC7Q96M83 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC31.15■■■□□ 2.58
CCDC7Q96M83 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC7Q96M83 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC31.14■■■□□ 2.58
CCDC7Q96M83 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC31.14■■■□□ 2.58
CCDC7Q96M83 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC31.14■■■□□ 2.58
CCDC7Q96M83 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC7Q96M83 AL355001.2-201ENST00000620617 1191 ntBASIC31.14■■■□□ 2.58
CCDC7Q96M83 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC31.14■■■□□ 2.57
CCDC7Q96M83 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms