Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM54Q969K7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM54Q969K7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM54Q969K7 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.71■□□□□ 0.75
TMEM54Q969K7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.71■□□□□ 0.75
TMEM54Q969K7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TMEM54Q969K7 C9orf163-202ENST00000624034 2573 ntBASIC19.71■□□□□ 0.75
TMEM54Q969K7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM54Q969K7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.7■□□□□ 0.74
TMEM54Q969K7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM54Q969K7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM54Q969K7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM54Q969K7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM54Q969K7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM54Q969K7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM54Q969K7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM54Q969K7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM54Q969K7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM54Q969K7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM54Q969K7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM54Q969K7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM54Q969K7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TMEM54Q969K7 AC241377.3-202ENST00000626088 1088 ntBASIC19.69■□□□□ 0.74
TMEM54Q969K7 AC241585.3-202ENST00000628937 1088 ntBASIC19.69■□□□□ 0.74
TMEM54Q969K7 AC245100.8-202ENST00000629247 1058 ntBASIC19.69■□□□□ 0.74
TMEM54Q969K7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM54Q969K7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM54Q969K7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM54Q969K7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM54Q969K7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TMEM54Q969K7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM54Q969K7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM54Q969K7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TMEM54Q969K7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TMEM54Q969K7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.68■□□□□ 0.74
TMEM54Q969K7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
TMEM54Q969K7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEM54Q969K7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TMEM54Q969K7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM54Q969K7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEM54Q969K7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.68■□□□□ 0.74
TMEM54Q969K7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM54Q969K7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEM54Q969K7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM54Q969K7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM54Q969K7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM54Q969K7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TMEM54Q969K7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TMEM54Q969K7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
TMEM54Q969K7 AC012676.1-201ENST00000574705 1949 ntBASIC19.67■□□□□ 0.74
TMEM54Q969K7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM54Q969K7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM54Q969K7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM54Q969K7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM54Q969K7 AC009086.3-201ENST00000623486 1008 ntBASIC19.67■□□□□ 0.74
TMEM54Q969K7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM54Q969K7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM54Q969K7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TMEM54Q969K7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM54Q969K7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.67■□□□□ 0.74
TMEM54Q969K7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM54Q969K7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.66■□□□□ 0.74
TMEM54Q969K7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM54Q969K7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.66■□□□□ 0.74
TMEM54Q969K7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.66■□□□□ 0.74
TMEM54Q969K7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM54Q969K7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.66■□□□□ 0.74
TMEM54Q969K7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.66■□□□□ 0.74
TMEM54Q969K7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM54Q969K7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM54Q969K7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM54Q969K7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM54Q969K7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM54Q969K7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM54Q969K7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM54Q969K7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TMEM54Q969K7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
TMEM54Q969K7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
TMEM54Q969K7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.64■□□□□ 0.74
TMEM54Q969K7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM54Q969K7 SRD5A1P1-201ENST00000442297 786 ntBASIC19.64■□□□□ 0.73
TMEM54Q969K7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.64■□□□□ 0.73
TMEM54Q969K7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM54Q969K7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM54Q969K7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.64■□□□□ 0.73
TMEM54Q969K7 MIR4466-201ENST00000606121 54 ntBASIC19.64■□□□□ 0.73
TMEM54Q969K7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.64■□□□□ 0.73
TMEM54Q969K7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.64■□□□□ 0.73
TMEM54Q969K7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
TMEM54Q969K7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM54Q969K7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TMEM54Q969K7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TMEM54Q969K7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM54Q969K7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM54Q969K7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM54Q969K7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM54Q969K7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TMEM54Q969K7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM54Q969K7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM54Q969K7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms