Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ATP6V0A1Q93050 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
ATP6V0A1Q93050 AC087623.3-201ENST00000607047 1098 ntBASIC25.05■■□□□ 1.6
ATP6V0A1Q93050 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ATP6V0A1Q93050 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ATP6V0A1Q93050 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP6V0A1Q93050 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP6V0A1Q93050 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ATP6V0A1Q93050 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP6V0A1Q93050 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.04■■□□□ 1.6
ATP6V0A1Q93050 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.04■■□□□ 1.6
ATP6V0A1Q93050 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP6V0A1Q93050 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP6V0A1Q93050 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ATP6V0A1Q93050 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.04■■□□□ 1.6
ATP6V0A1Q93050 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP6V0A1Q93050 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.04■■□□□ 1.6
ATP6V0A1Q93050 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.03■■□□□ 1.6
ATP6V0A1Q93050 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATP6V0A1Q93050 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
ATP6V0A1Q93050 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.03■■□□□ 1.6
ATP6V0A1Q93050 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.03■■□□□ 1.6
ATP6V0A1Q93050 DUX4L4-201ENST00000566884 1269 ntBASIC25.03■■□□□ 1.6
ATP6V0A1Q93050 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATP6V0A1Q93050 LINC01529-204ENST00000636474 1715 ntBASIC25.03■■□□□ 1.6
ATP6V0A1Q93050 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
ATP6V0A1Q93050 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ATP6V0A1Q93050 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.02■■□□□ 1.6
ATP6V0A1Q93050 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.02■■□□□ 1.6
ATP6V0A1Q93050 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.02■■□□□ 1.6
ATP6V0A1Q93050 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ATP6V0A1Q93050 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ATP6V0A1Q93050 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.02■■□□□ 1.6
ATP6V0A1Q93050 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ATP6V0A1Q93050 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
ATP6V0A1Q93050 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ATP6V0A1Q93050 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.01■■□□□ 1.59
ATP6V0A1Q93050 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.01■■□□□ 1.59
ATP6V0A1Q93050 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
ATP6V0A1Q93050 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
ATP6V0A1Q93050 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ATP6V0A1Q93050 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
ATP6V0A1Q93050 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25■■□□□ 1.59
ATP6V0A1Q93050 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
ATP6V0A1Q93050 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25■■□□□ 1.59
ATP6V0A1Q93050 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP6V0A1Q93050 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25■■□□□ 1.59
ATP6V0A1Q93050 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25■■□□□ 1.59
ATP6V0A1Q93050 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25■■□□□ 1.59
ATP6V0A1Q93050 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP6V0A1Q93050 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP6V0A1Q93050 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ATP6V0A1Q93050 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ATP6V0A1Q93050 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.99■■□□□ 1.59
ATP6V0A1Q93050 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATP6V0A1Q93050 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATP6V0A1Q93050 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.98■■□□□ 1.59
ATP6V0A1Q93050 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.98■■□□□ 1.59
ATP6V0A1Q93050 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATP6V0A1Q93050 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
ATP6V0A1Q93050 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
ATP6V0A1Q93050 AC079630.1-202ENST00000618127 1840 ntBASIC24.98■■□□□ 1.59
ATP6V0A1Q93050 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.97■■□□□ 1.59
ATP6V0A1Q93050 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ATP6V0A1Q93050 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ATP6V0A1Q93050 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ATP6V0A1Q93050 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.97■■□□□ 1.59
ATP6V0A1Q93050 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.97■■□□□ 1.59
ATP6V0A1Q93050 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.97■■□□□ 1.59
ATP6V0A1Q93050 AC126544.1-201ENST00000580842 1059 ntBASIC24.97■■□□□ 1.59
ATP6V0A1Q93050 AL499627.2-201ENST00000606283 725 ntBASIC24.97■■□□□ 1.59
ATP6V0A1Q93050 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ATP6V0A1Q93050 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.97■■□□□ 1.59
ATP6V0A1Q93050 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
ATP6V0A1Q93050 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
ATP6V0A1Q93050 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP6V0A1Q93050 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP6V0A1Q93050 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.96■■□□□ 1.59
ATP6V0A1Q93050 AL162430.1-201ENST00000480705 870 ntBASIC24.96■■□□□ 1.59
ATP6V0A1Q93050 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP6V0A1Q93050 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.96■■□□□ 1.59
ATP6V0A1Q93050 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.96■■□□□ 1.59
ATP6V0A1Q93050 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP6V0A1Q93050 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP6V0A1Q93050 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ATP6V0A1Q93050 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
ATP6V0A1Q93050 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.96■■□□□ 1.59
ATP6V0A1Q93050 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
ATP6V0A1Q93050 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.95■■□□□ 1.58
ATP6V0A1Q93050 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
ATP6V0A1Q93050 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.95■■□□□ 1.58
ATP6V0A1Q93050 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.95■■□□□ 1.58
ATP6V0A1Q93050 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ATP6V0A1Q93050 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ATP6V0A1Q93050 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ATP6V0A1Q93050 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ATP6V0A1Q93050 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ATP6V0A1Q93050 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
ATP6V0A1Q93050 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.94■■□□□ 1.58
ATP6V0A1Q93050 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms