Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RAB40AQ8WXH6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40AQ8WXH6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.53■□□□□ 0.72
RAB40AQ8WXH6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40AQ8WXH6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40AQ8WXH6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40AQ8WXH6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40AQ8WXH6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.53■□□□□ 0.72
RAB40AQ8WXH6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.53■□□□□ 0.72
RAB40AQ8WXH6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40AQ8WXH6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB40AQ8WXH6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RAB40AQ8WXH6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RAB40AQ8WXH6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40AQ8WXH6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB40AQ8WXH6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RAB40AQ8WXH6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RAB40AQ8WXH6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB40AQ8WXH6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB40AQ8WXH6 AC120024.1-201ENST00000562672 995 ntBASIC19.52■□□□□ 0.72
RAB40AQ8WXH6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.52■□□□□ 0.72
RAB40AQ8WXH6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 Z92544.1-202ENST00000571933 1220 ntBASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB40AQ8WXH6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 AC007375.3-201ENST00000600936 2314 ntBASIC19.5■□□□□ 0.71
RAB40AQ8WXH6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40AQ8WXH6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40AQ8WXH6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40AQ8WXH6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40AQ8WXH6 AC090877.2-201ENST00000558441 1738 ntBASIC19.49■□□□□ 0.71
RAB40AQ8WXH6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40AQ8WXH6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40AQ8WXH6 BX664725.1-201ENST00000438252 379 ntBASIC19.49■□□□□ 0.71
RAB40AQ8WXH6 AC239859.2-201ENST00000444165 318 ntBASIC19.49■□□□□ 0.71
RAB40AQ8WXH6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
RAB40AQ8WXH6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40AQ8WXH6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40AQ8WXH6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40AQ8WXH6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40AQ8WXH6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40AQ8WXH6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB40AQ8WXH6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40AQ8WXH6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40AQ8WXH6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40AQ8WXH6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40AQ8WXH6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40AQ8WXH6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RAB40AQ8WXH6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.48■□□□□ 0.71
RAB40AQ8WXH6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40AQ8WXH6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB40AQ8WXH6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB40AQ8WXH6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
RAB40AQ8WXH6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40AQ8WXH6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40AQ8WXH6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40AQ8WXH6 GUSBP5-201ENST00000418136 578 ntBASIC19.47■□□□□ 0.71
RAB40AQ8WXH6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms