Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 AC133552.2-201ENST00000619106 1032 ntBASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 AC009831.1-201ENST00000580420 1582 ntBASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRUB1Q8WWH5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TRUB1Q8WWH5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TRUB1Q8WWH5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB1Q8WWH5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB1Q8WWH5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB1Q8WWH5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB1Q8WWH5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.4■□□□□ 0.86
TRUB1Q8WWH5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB1Q8WWH5 AC087393.1-201ENST00000582896 145 ntBASIC20.4■□□□□ 0.86
TRUB1Q8WWH5 AC018755.3-202ENST00000596210 929 ntBASIC20.4■□□□□ 0.86
TRUB1Q8WWH5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRUB1Q8WWH5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRUB1Q8WWH5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRUB1Q8WWH5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRUB1Q8WWH5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRUB1Q8WWH5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRUB1Q8WWH5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRUB1Q8WWH5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRUB1Q8WWH5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.39■□□□□ 0.85
TRUB1Q8WWH5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRUB1Q8WWH5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRUB1Q8WWH5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRUB1Q8WWH5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRUB1Q8WWH5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB1Q8WWH5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB1Q8WWH5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB1Q8WWH5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB1Q8WWH5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB1Q8WWH5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB1Q8WWH5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRUB1Q8WWH5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.38■□□□□ 0.85
TRUB1Q8WWH5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRUB1Q8WWH5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
TRUB1Q8WWH5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRUB1Q8WWH5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRUB1Q8WWH5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRUB1Q8WWH5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRUB1Q8WWH5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRUB1Q8WWH5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRUB1Q8WWH5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.36■□□□□ 0.85
TRUB1Q8WWH5 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRUB1Q8WWH5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRUB1Q8WWH5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRUB1Q8WWH5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRUB1Q8WWH5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.35■□□□□ 0.85
TRUB1Q8WWH5 AC131274.2-201ENST00000580697 1507 ntBASIC20.35■□□□□ 0.85
TRUB1Q8WWH5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRUB1Q8WWH5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRUB1Q8WWH5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TRUB1Q8WWH5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRUB1Q8WWH5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.35■□□□□ 0.85
TRUB1Q8WWH5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRUB1Q8WWH5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRUB1Q8WWH5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.34■□□□□ 0.85
TRUB1Q8WWH5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRUB1Q8WWH5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRUB1Q8WWH5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRUB1Q8WWH5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.34■□□□□ 0.85
TRUB1Q8WWH5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRUB1Q8WWH5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRUB1Q8WWH5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRUB1Q8WWH5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRUB1Q8WWH5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.34■□□□□ 0.85
TRUB1Q8WWH5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
TRUB1Q8WWH5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRUB1Q8WWH5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.33■□□□□ 0.85
TRUB1Q8WWH5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRUB1Q8WWH5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms