Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPS4Y2Q8TD47 C11orf96-202ENST00000528572 1834 ntBASIC19.58■□□□□ 0.72
RPS4Y2Q8TD47 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RPS4Y2Q8TD47 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RPS4Y2Q8TD47 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RPS4Y2Q8TD47 TSPY13P-201ENST00000338964 914 ntBASIC19.57■□□□□ 0.72
RPS4Y2Q8TD47 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RPS4Y2Q8TD47 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.57■□□□□ 0.72
RPS4Y2Q8TD47 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4Y2Q8TD47 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4Y2Q8TD47 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
RPS4Y2Q8TD47 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
RPS4Y2Q8TD47 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4Y2Q8TD47 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4Y2Q8TD47 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.56■□□□□ 0.72
RPS4Y2Q8TD47 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4Y2Q8TD47 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
RPS4Y2Q8TD47 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4Y2Q8TD47 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RPS4Y2Q8TD47 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4Y2Q8TD47 AC120024.1-201ENST00000562672 995 ntBASIC19.56■□□□□ 0.72
RPS4Y2Q8TD47 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.56■□□□□ 0.72
RPS4Y2Q8TD47 AC087742.1-201ENST00000575880 1738 ntBASIC19.56■□□□□ 0.72
RPS4Y2Q8TD47 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 ATP5G2P3-201ENST00000429083 425 ntBASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4Y2Q8TD47 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 AC080038.3-201ENST00000623346 1952 ntBASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.54■□□□□ 0.72
RPS4Y2Q8TD47 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y2Q8TD47 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.53■□□□□ 0.72
RPS4Y2Q8TD47 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y2Q8TD47 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RPS4Y2Q8TD47 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y2Q8TD47 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RPS4Y2Q8TD47 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y2Q8TD47 AC004987.1-201ENST00000428627 508 ntBASIC19.53■□□□□ 0.72
RPS4Y2Q8TD47 AL033527.3-201ENST00000566366 1196 ntBASIC19.53■□□□□ 0.72
RPS4Y2Q8TD47 MIR4281-201ENST00000580852 62 ntBASIC19.53■□□□□ 0.72
RPS4Y2Q8TD47 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y2Q8TD47 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.53■□□□□ 0.72
RPS4Y2Q8TD47 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4Y2Q8TD47 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RPS4Y2Q8TD47 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4Y2Q8TD47 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4Y2Q8TD47 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4Y2Q8TD47 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4Y2Q8TD47 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RPS4Y2Q8TD47 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4Y2Q8TD47 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4Y2Q8TD47 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.52■□□□□ 0.72
RPS4Y2Q8TD47 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.52■□□□□ 0.71
RPS4Y2Q8TD47 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RPS4Y2Q8TD47 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
RPS4Y2Q8TD47 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RPS4Y2Q8TD47 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RPS4Y2Q8TD47 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y2Q8TD47 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y2Q8TD47 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RPS4Y2Q8TD47 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.51■□□□□ 0.71
RPS4Y2Q8TD47 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y2Q8TD47 THA1P-201ENST00000590384 1145 ntBASIC19.51■□□□□ 0.71
RPS4Y2Q8TD47 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y2Q8TD47 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y2Q8TD47 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y2Q8TD47 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y2Q8TD47 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y2Q8TD47 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RPS4Y2Q8TD47 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RPS4Y2Q8TD47 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y2Q8TD47 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RPS4Y2Q8TD47 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y2Q8TD47 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y2Q8TD47 KRT18P24-201ENST00000344739 1156 ntBASIC19.5■□□□□ 0.71
RPS4Y2Q8TD47 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y2Q8TD47 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms