Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDH19Q8TAB3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH19Q8TAB3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDH19Q8TAB3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH19Q8TAB3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDH19Q8TAB3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
PCDH19Q8TAB3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH19Q8TAB3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDH19Q8TAB3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDH19Q8TAB3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH19Q8TAB3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH19Q8TAB3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH19Q8TAB3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH19Q8TAB3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDH19Q8TAB3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH19Q8TAB3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH19Q8TAB3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PCDH19Q8TAB3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH19Q8TAB3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
PCDH19Q8TAB3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH19Q8TAB3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PCDH19Q8TAB3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH19Q8TAB3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH19Q8TAB3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDH19Q8TAB3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.06■■□□□ 1.28
PCDH19Q8TAB3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
PCDH19Q8TAB3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH19Q8TAB3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDH19Q8TAB3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDH19Q8TAB3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH19Q8TAB3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDH19Q8TAB3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH19Q8TAB3 FP325331.1-202ENST00000623531 1380 ntBASIC23.05■■□□□ 1.28
PCDH19Q8TAB3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDH19Q8TAB3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH19Q8TAB3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH19Q8TAB3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH19Q8TAB3 LINC01529-204ENST00000636474 1715 ntBASIC23.05■■□□□ 1.28
PCDH19Q8TAB3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH19Q8TAB3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH19Q8TAB3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.04■■□□□ 1.28
PCDH19Q8TAB3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.04■■□□□ 1.28
PCDH19Q8TAB3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.04■■□□□ 1.28
PCDH19Q8TAB3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH19Q8TAB3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH19Q8TAB3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDH19Q8TAB3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDH19Q8TAB3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDH19Q8TAB3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDH19Q8TAB3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDH19Q8TAB3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH19Q8TAB3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH19Q8TAB3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDH19Q8TAB3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH19Q8TAB3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PCDH19Q8TAB3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH19Q8TAB3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDH19Q8TAB3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH19Q8TAB3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH19Q8TAB3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PCDH19Q8TAB3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDH19Q8TAB3 C17orf82-201ENST00000623772 1530 ntBASIC23.03■■□□□ 1.28
PCDH19Q8TAB3 AC008406.3-201ENST00000620001 1374 ntBASIC23.02■■□□□ 1.28
PCDH19Q8TAB3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH19Q8TAB3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.02■■□□□ 1.28
PCDH19Q8TAB3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.02■■□□□ 1.28
PCDH19Q8TAB3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDH19Q8TAB3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH19Q8TAB3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH19Q8TAB3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH19Q8TAB3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH19Q8TAB3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDH19Q8TAB3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH19Q8TAB3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH19Q8TAB3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH19Q8TAB3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PCDH19Q8TAB3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDH19Q8TAB3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH19Q8TAB3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH19Q8TAB3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDH19Q8TAB3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDH19Q8TAB3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23■■□□□ 1.27
PCDH19Q8TAB3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH19Q8TAB3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH19Q8TAB3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH19Q8TAB3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH19Q8TAB3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH19Q8TAB3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
PCDH19Q8TAB3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH19Q8TAB3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH19Q8TAB3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PCDH19Q8TAB3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDH19Q8TAB3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDH19Q8TAB3 DUX4L4-201ENST00000566884 1269 ntBASIC22.99■■□□□ 1.27
PCDH19Q8TAB3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH19Q8TAB3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH19Q8TAB3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH19Q8TAB3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH19Q8TAB3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH19Q8TAB3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms