Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 AC020763.4-201ENST00000623414 4170 ntBASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 DUSP8P5-201ENST00000422884 1815 ntBASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 AC127502.1-201ENST00000399971 1502 ntBASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPTSSBQ8NFR3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPTSSBQ8NFR3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SPTSSBQ8NFR3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC12.3□□□□□ -0.44
SPTSSBQ8NFR3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SPTSSBQ8NFR3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPTSSBQ8NFR3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SPTSSBQ8NFR3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC12.3□□□□□ -0.44
SPTSSBQ8NFR3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPTSSBQ8NFR3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPTSSBQ8NFR3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPTSSBQ8NFR3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPTSSBQ8NFR3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC12.3□□□□□ -0.44
SPTSSBQ8NFR3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 OR6D1P-202ENST00000641007 5290 ntBASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPTSSBQ8NFR3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 AC106820.2-201ENST00000563775 3264 ntBASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPTSSBQ8NFR3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SPTSSBQ8NFR3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SPTSSBQ8NFR3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SPTSSBQ8NFR3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
SPTSSBQ8NFR3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPTSSBQ8NFR3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
SPTSSBQ8NFR3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SPTSSBQ8NFR3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPTSSBQ8NFR3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SPTSSBQ8NFR3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
SPTSSBQ8NFR3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC12.27□□□□□ -0.45
SPTSSBQ8NFR3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms