Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPEB3Q8NE35 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPEB3Q8NE35 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.5■□□□□ 0.71
CPEB3Q8NE35 AL512631.2-201ENST00000604634 923 ntBASIC19.5■□□□□ 0.71
CPEB3Q8NE35 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.5■□□□□ 0.71
CPEB3Q8NE35 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPEB3Q8NE35 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPEB3Q8NE35 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPEB3Q8NE35 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPEB3Q8NE35 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPEB3Q8NE35 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPEB3Q8NE35 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.49■□□□□ 0.71
CPEB3Q8NE35 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
CPEB3Q8NE35 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPEB3Q8NE35 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.49■□□□□ 0.71
CPEB3Q8NE35 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPEB3Q8NE35 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CPEB3Q8NE35 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPEB3Q8NE35 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.48■□□□□ 0.71
CPEB3Q8NE35 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPEB3Q8NE35 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPEB3Q8NE35 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.48■□□□□ 0.71
CPEB3Q8NE35 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.48■□□□□ 0.71
CPEB3Q8NE35 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPEB3Q8NE35 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPEB3Q8NE35 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPEB3Q8NE35 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CPEB3Q8NE35 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CPEB3Q8NE35 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPEB3Q8NE35 FP325331.1-202ENST00000623531 1380 ntBASIC19.47■□□□□ 0.71
CPEB3Q8NE35 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.47■□□□□ 0.71
CPEB3Q8NE35 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.47■□□□□ 0.71
CPEB3Q8NE35 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.47■□□□□ 0.71
CPEB3Q8NE35 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.47■□□□□ 0.71
CPEB3Q8NE35 MIR4466-201ENST00000606121 54 ntBASIC19.47■□□□□ 0.71
CPEB3Q8NE35 C9orf163-202ENST00000624034 2573 ntBASIC19.47■□□□□ 0.71
CPEB3Q8NE35 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPEB3Q8NE35 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CPEB3Q8NE35 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
CPEB3Q8NE35 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.46■□□□□ 0.71
CPEB3Q8NE35 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.46■□□□□ 0.71
CPEB3Q8NE35 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.46■□□□□ 0.71
CPEB3Q8NE35 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.46■□□□□ 0.71
CPEB3Q8NE35 LINC01529-204ENST00000636474 1715 ntBASIC19.46■□□□□ 0.71
CPEB3Q8NE35 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPEB3Q8NE35 AC131281.2-201ENST00000520478 145 ntBASIC19.46■□□□□ 0.71
CPEB3Q8NE35 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPEB3Q8NE35 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPEB3Q8NE35 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPEB3Q8NE35 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.46■□□□□ 0.71
CPEB3Q8NE35 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPEB3Q8NE35 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPEB3Q8NE35 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
CPEB3Q8NE35 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.45■□□□□ 0.7
CPEB3Q8NE35 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.45■□□□□ 0.7
CPEB3Q8NE35 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPEB3Q8NE35 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CPEB3Q8NE35 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.45■□□□□ 0.7
CPEB3Q8NE35 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.45■□□□□ 0.7
CPEB3Q8NE35 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.45■□□□□ 0.7
CPEB3Q8NE35 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPEB3Q8NE35 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CPEB3Q8NE35 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPEB3Q8NE35 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPEB3Q8NE35 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPEB3Q8NE35 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CPEB3Q8NE35 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPEB3Q8NE35 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.44■□□□□ 0.7
CPEB3Q8NE35 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.44■□□□□ 0.7
CPEB3Q8NE35 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.44■□□□□ 0.7
CPEB3Q8NE35 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPEB3Q8NE35 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPEB3Q8NE35 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPEB3Q8NE35 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.43■□□□□ 0.7
CPEB3Q8NE35 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.43■□□□□ 0.7
CPEB3Q8NE35 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CPEB3Q8NE35 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPEB3Q8NE35 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPEB3Q8NE35 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPEB3Q8NE35 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPEB3Q8NE35 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPEB3Q8NE35 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.43■□□□□ 0.7
CPEB3Q8NE35 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.43■□□□□ 0.7
CPEB3Q8NE35 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.43■□□□□ 0.7
CPEB3Q8NE35 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPEB3Q8NE35 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPEB3Q8NE35 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPEB3Q8NE35 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.42■□□□□ 0.7
CPEB3Q8NE35 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CPEB3Q8NE35 DUX4L4-201ENST00000566884 1269 ntBASIC19.42■□□□□ 0.7
CPEB3Q8NE35 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.42■□□□□ 0.7
CPEB3Q8NE35 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.42■□□□□ 0.7
CPEB3Q8NE35 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CPEB3Q8NE35 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.42■□□□□ 0.7
CPEB3Q8NE35 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.42■□□□□ 0.7
CPEB3Q8NE35 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CPEB3Q8NE35 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CPEB3Q8NE35 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CPEB3Q8NE35 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CPEB3Q8NE35 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms