Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC131274.2-201ENST00000580697 1507 ntBASIC18.55■□□□□ 0.56
CCDC71LQ8N9Z2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC71LQ8N9Z2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71LQ8N9Z2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC71LQ8N9Z2 AC011551.1-201ENST00000614101 683 ntBASIC18.55■□□□□ 0.56
CCDC71LQ8N9Z2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71LQ8N9Z2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71LQ8N9Z2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC71LQ8N9Z2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC71LQ8N9Z2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC71LQ8N9Z2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71LQ8N9Z2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71LQ8N9Z2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71LQ8N9Z2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71LQ8N9Z2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC71LQ8N9Z2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CCDC71LQ8N9Z2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71LQ8N9Z2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71LQ8N9Z2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71LQ8N9Z2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71LQ8N9Z2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71LQ8N9Z2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC71LQ8N9Z2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71LQ8N9Z2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC71LQ8N9Z2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC71LQ8N9Z2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC71LQ8N9Z2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC71LQ8N9Z2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC71LQ8N9Z2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC71LQ8N9Z2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CCDC71LQ8N9Z2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC71LQ8N9Z2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC71LQ8N9Z2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC71LQ8N9Z2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC71LQ8N9Z2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC71LQ8N9Z2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC71LQ8N9Z2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC71LQ8N9Z2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC71LQ8N9Z2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC71LQ8N9Z2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 AC079630.1-202ENST00000618127 1840 ntBASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 MIR6765-201ENST00000614092 87 ntBASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 AC092053.2-201ENST00000640557 1818 ntBASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71LQ8N9Z2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71LQ8N9Z2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC71LQ8N9Z2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71LQ8N9Z2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71LQ8N9Z2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71LQ8N9Z2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC71LQ8N9Z2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC71LQ8N9Z2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71LQ8N9Z2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC71LQ8N9Z2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC71LQ8N9Z2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC71LQ8N9Z2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC71LQ8N9Z2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC71LQ8N9Z2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71LQ8N9Z2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71LQ8N9Z2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71LQ8N9Z2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71LQ8N9Z2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71LQ8N9Z2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC71LQ8N9Z2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71LQ8N9Z2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71LQ8N9Z2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71LQ8N9Z2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC71LQ8N9Z2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC71LQ8N9Z2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms