Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
EXD3Q8N9H8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.01■□□□□ 0.95
EXD3Q8N9H8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EXD3Q8N9H8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EXD3Q8N9H8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
EXD3Q8N9H8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21■□□□□ 0.95
EXD3Q8N9H8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
EXD3Q8N9H8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EXD3Q8N9H8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21■□□□□ 0.95
EXD3Q8N9H8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21■□□□□ 0.95
EXD3Q8N9H8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21■□□□□ 0.95
EXD3Q8N9H8 MIR6084-201ENST00000622012 110 ntBASIC21■□□□□ 0.95
EXD3Q8N9H8 AL358852.1-201ENST00000623174 1268 ntBASIC21■□□□□ 0.95
EXD3Q8N9H8 AC009086.3-201ENST00000623486 1008 ntBASIC21■□□□□ 0.95
EXD3Q8N9H8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21■□□□□ 0.95
EXD3Q8N9H8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21■□□□□ 0.95
EXD3Q8N9H8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21■□□□□ 0.95
EXD3Q8N9H8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21■□□□□ 0.95
EXD3Q8N9H8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21■□□□□ 0.95
EXD3Q8N9H8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
EXD3Q8N9H8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXD3Q8N9H8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXD3Q8N9H8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXD3Q8N9H8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXD3Q8N9H8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.99■□□□□ 0.95
EXD3Q8N9H8 CCDC92B-201ENST00000575506 885 ntBASIC20.99■□□□□ 0.95
EXD3Q8N9H8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EXD3Q8N9H8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXD3Q8N9H8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.99■□□□□ 0.95
EXD3Q8N9H8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXD3Q8N9H8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXD3Q8N9H8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
EXD3Q8N9H8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
EXD3Q8N9H8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EXD3Q8N9H8 AC141586.4-201ENST00000624558 1573 ntBASIC20.98■□□□□ 0.95
EXD3Q8N9H8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.98■□□□□ 0.95
EXD3Q8N9H8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EXD3Q8N9H8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
EXD3Q8N9H8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EXD3Q8N9H8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.98■□□□□ 0.95
EXD3Q8N9H8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EXD3Q8N9H8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EXD3Q8N9H8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
EXD3Q8N9H8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
EXD3Q8N9H8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
EXD3Q8N9H8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
EXD3Q8N9H8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EXD3Q8N9H8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EXD3Q8N9H8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EXD3Q8N9H8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.97■□□□□ 0.95
EXD3Q8N9H8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
EXD3Q8N9H8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.97■□□□□ 0.95
EXD3Q8N9H8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.97■□□□□ 0.95
EXD3Q8N9H8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
EXD3Q8N9H8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EXD3Q8N9H8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.97■□□□□ 0.95
EXD3Q8N9H8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EXD3Q8N9H8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.97■□□□□ 0.95
EXD3Q8N9H8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
EXD3Q8N9H8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EXD3Q8N9H8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EXD3Q8N9H8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EXD3Q8N9H8 ESRRAP2-201ENST00000418437 1549 ntBASIC20.96■□□□□ 0.95
EXD3Q8N9H8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.96■□□□□ 0.95
EXD3Q8N9H8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
EXD3Q8N9H8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.96■□□□□ 0.95
EXD3Q8N9H8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.96■□□□□ 0.95
EXD3Q8N9H8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
EXD3Q8N9H8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EXD3Q8N9H8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
EXD3Q8N9H8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EXD3Q8N9H8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EXD3Q8N9H8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.95■□□□□ 0.94
EXD3Q8N9H8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EXD3Q8N9H8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
EXD3Q8N9H8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
EXD3Q8N9H8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
EXD3Q8N9H8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EXD3Q8N9H8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
EXD3Q8N9H8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
EXD3Q8N9H8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.93■□□□□ 0.94
EXD3Q8N9H8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
EXD3Q8N9H8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EXD3Q8N9H8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EXD3Q8N9H8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EXD3Q8N9H8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms