Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST3Q8N1M1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST3Q8N1M1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BEST3Q8N1M1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
BEST3Q8N1M1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BEST3Q8N1M1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
BEST3Q8N1M1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.66■□□□□ 0.9
BEST3Q8N1M1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.66■□□□□ 0.9
BEST3Q8N1M1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BEST3Q8N1M1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST3Q8N1M1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST3Q8N1M1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST3Q8N1M1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST3Q8N1M1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST3Q8N1M1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST3Q8N1M1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST3Q8N1M1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST3Q8N1M1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.65■□□□□ 0.9
BEST3Q8N1M1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BEST3Q8N1M1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST3Q8N1M1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST3Q8N1M1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST3Q8N1M1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.65■□□□□ 0.9
BEST3Q8N1M1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.65■□□□□ 0.9
BEST3Q8N1M1 RARRES2P6-201ENST00000567333 442 ntBASIC20.65■□□□□ 0.9
BEST3Q8N1M1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
BEST3Q8N1M1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.65■□□□□ 0.9
BEST3Q8N1M1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.65■□□□□ 0.9
BEST3Q8N1M1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
BEST3Q8N1M1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BEST3Q8N1M1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
BEST3Q8N1M1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BEST3Q8N1M1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST3Q8N1M1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.64■□□□□ 0.89
BEST3Q8N1M1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.64■□□□□ 0.89
BEST3Q8N1M1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
BEST3Q8N1M1 AC233992.3-201ENST00000607491 485 ntBASIC20.64■□□□□ 0.89
BEST3Q8N1M1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST3Q8N1M1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BEST3Q8N1M1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST3Q8N1M1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
BEST3Q8N1M1 LINC00543-201ENST00000567234 1845 ntBASIC20.64■□□□□ 0.89
BEST3Q8N1M1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST3Q8N1M1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BEST3Q8N1M1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST3Q8N1M1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
BEST3Q8N1M1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BEST3Q8N1M1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BEST3Q8N1M1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
BEST3Q8N1M1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST3Q8N1M1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST3Q8N1M1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST3Q8N1M1 BX842568.3-201ENST00000418104 571 ntBASIC20.63■□□□□ 0.89
BEST3Q8N1M1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.63■□□□□ 0.89
BEST3Q8N1M1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BEST3Q8N1M1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BEST3Q8N1M1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BEST3Q8N1M1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BEST3Q8N1M1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.62■□□□□ 0.89
BEST3Q8N1M1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST3Q8N1M1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.62■□□□□ 0.89
BEST3Q8N1M1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST3Q8N1M1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST3Q8N1M1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.62■□□□□ 0.89
BEST3Q8N1M1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
BEST3Q8N1M1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST3Q8N1M1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.61■□□□□ 0.89
BEST3Q8N1M1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST3Q8N1M1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.61■□□□□ 0.89
BEST3Q8N1M1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BEST3Q8N1M1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BEST3Q8N1M1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
BEST3Q8N1M1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BEST3Q8N1M1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST3Q8N1M1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST3Q8N1M1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.6■□□□□ 0.89
BEST3Q8N1M1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
BEST3Q8N1M1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST3Q8N1M1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.6■□□□□ 0.89
BEST3Q8N1M1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BEST3Q8N1M1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST3Q8N1M1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST3Q8N1M1 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.6■□□□□ 0.89
BEST3Q8N1M1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BEST3Q8N1M1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.6■□□□□ 0.89
BEST3Q8N1M1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
BEST3Q8N1M1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BEST3Q8N1M1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
BEST3Q8N1M1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
BEST3Q8N1M1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.59■□□□□ 0.89
BEST3Q8N1M1 AC026271.2-201ENST00000428091 497 ntBASIC20.59■□□□□ 0.89
BEST3Q8N1M1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.59■□□□□ 0.89
BEST3Q8N1M1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.59■□□□□ 0.89
BEST3Q8N1M1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST3Q8N1M1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BEST3Q8N1M1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BEST3Q8N1M1 FP325331.1-202ENST00000623531 1380 ntBASIC20.59■□□□□ 0.89
BEST3Q8N1M1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.58■□□□□ 0.89
BEST3Q8N1M1 SLC47A1P1-202ENST00000449666 945 ntBASIC20.58■□□□□ 0.89
BEST3Q8N1M1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms