Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
RAPH1Q70E73 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPH1Q70E73 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RAPH1Q70E73 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RAPH1Q70E73 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.33■■□□□ 1.16
RAPH1Q70E73 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.33■■□□□ 1.16
RAPH1Q70E73 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPH1Q70E73 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPH1Q70E73 KRT8P33-201ENST00000508125 1423 ntBASIC22.32■■□□□ 1.16
RAPH1Q70E73 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPH1Q70E73 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPH1Q70E73 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPH1Q70E73 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RAPH1Q70E73 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.32■■□□□ 1.16
RAPH1Q70E73 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.32■■□□□ 1.16
RAPH1Q70E73 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RAPH1Q70E73 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPH1Q70E73 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPH1Q70E73 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPH1Q70E73 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.32■■□□□ 1.16
RAPH1Q70E73 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPH1Q70E73 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.31■■□□□ 1.16
RAPH1Q70E73 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPH1Q70E73 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RAPH1Q70E73 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RAPH1Q70E73 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.31■■□□□ 1.16
RAPH1Q70E73 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPH1Q70E73 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.31■■□□□ 1.16
RAPH1Q70E73 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPH1Q70E73 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPH1Q70E73 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.31■■□□□ 1.16
RAPH1Q70E73 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
RAPH1Q70E73 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
RAPH1Q70E73 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RAPH1Q70E73 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPH1Q70E73 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPH1Q70E73 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPH1Q70E73 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.3■■□□□ 1.16
RAPH1Q70E73 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPH1Q70E73 YBX1P4-201ENST00000392794 808 ntBASIC22.3■■□□□ 1.16
RAPH1Q70E73 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.3■■□□□ 1.16
RAPH1Q70E73 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.3■■□□□ 1.16
RAPH1Q70E73 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.3■■□□□ 1.16
RAPH1Q70E73 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
RAPH1Q70E73 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPH1Q70E73 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPH1Q70E73 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPH1Q70E73 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPH1Q70E73 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
RAPH1Q70E73 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
RAPH1Q70E73 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPH1Q70E73 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RAPH1Q70E73 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPH1Q70E73 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.29■■□□□ 1.16
RAPH1Q70E73 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPH1Q70E73 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPH1Q70E73 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RAPH1Q70E73 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPH1Q70E73 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPH1Q70E73 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.28■■□□□ 1.16
RAPH1Q70E73 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAPH1Q70E73 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPH1Q70E73 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPH1Q70E73 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPH1Q70E73 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPH1Q70E73 GUSBP5-202ENST00000510805 1989 ntBASIC22.28■■□□□ 1.16
RAPH1Q70E73 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPH1Q70E73 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAPH1Q70E73 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPH1Q70E73 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPH1Q70E73 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.28■■□□□ 1.16
RAPH1Q70E73 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPH1Q70E73 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPH1Q70E73 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPH1Q70E73 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RAPH1Q70E73 AC103834.1-201ENST00000520383 144 ntBASIC22.27■■□□□ 1.16
RAPH1Q70E73 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPH1Q70E73 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.27■■□□□ 1.16
RAPH1Q70E73 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RAPH1Q70E73 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAPH1Q70E73 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPH1Q70E73 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
RAPH1Q70E73 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPH1Q70E73 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPH1Q70E73 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.26■■□□□ 1.15
RAPH1Q70E73 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPH1Q70E73 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RAPH1Q70E73 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPH1Q70E73 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.25■■□□□ 1.15
RAPH1Q70E73 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPH1Q70E73 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPH1Q70E73 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
RAPH1Q70E73 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.25■■□□□ 1.15
RAPH1Q70E73 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.25■■□□□ 1.15
RAPH1Q70E73 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RAPH1Q70E73 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.25■■□□□ 1.15
RAPH1Q70E73 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPH1Q70E73 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPH1Q70E73 AL353803.4-201ENST00000565882 1934 ntBASIC22.25■■□□□ 1.15
RAPH1Q70E73 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms