Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDHR3Q6ZTQ4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDHR3Q6ZTQ4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDHR3Q6ZTQ4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CDHR3Q6ZTQ4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDHR3Q6ZTQ4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CDHR3Q6ZTQ4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.42■■□□□ 1.18
CDHR3Q6ZTQ4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.42■■□□□ 1.18
CDHR3Q6ZTQ4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDHR3Q6ZTQ4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDHR3Q6ZTQ4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDHR3Q6ZTQ4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
CDHR3Q6ZTQ4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CDHR3Q6ZTQ4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.41■■□□□ 1.18
CDHR3Q6ZTQ4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CDHR3Q6ZTQ4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDHR3Q6ZTQ4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDHR3Q6ZTQ4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDHR3Q6ZTQ4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDHR3Q6ZTQ4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDHR3Q6ZTQ4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.41■■□□□ 1.18
CDHR3Q6ZTQ4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDHR3Q6ZTQ4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CDHR3Q6ZTQ4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.41■■□□□ 1.18
CDHR3Q6ZTQ4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CDHR3Q6ZTQ4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDHR3Q6ZTQ4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDHR3Q6ZTQ4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.4■■□□□ 1.18
CDHR3Q6ZTQ4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDHR3Q6ZTQ4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.4■■□□□ 1.18
CDHR3Q6ZTQ4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.4■■□□□ 1.18
CDHR3Q6ZTQ4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDHR3Q6ZTQ4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDHR3Q6ZTQ4 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.4■■□□□ 1.18
CDHR3Q6ZTQ4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDHR3Q6ZTQ4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDHR3Q6ZTQ4 AC079630.1-202ENST00000618127 1840 ntBASIC22.39■■□□□ 1.17
CDHR3Q6ZTQ4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDHR3Q6ZTQ4 AL356441.2-201ENST00000443009 864 ntBASIC22.39■■□□□ 1.17
CDHR3Q6ZTQ4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.39■■□□□ 1.17
CDHR3Q6ZTQ4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
CDHR3Q6ZTQ4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.39■■□□□ 1.17
CDHR3Q6ZTQ4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDHR3Q6ZTQ4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDHR3Q6ZTQ4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.39■■□□□ 1.17
CDHR3Q6ZTQ4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDHR3Q6ZTQ4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDHR3Q6ZTQ4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDHR3Q6ZTQ4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CDHR3Q6ZTQ4 AF131216.4-201ENST00000638924 1588 ntBASIC22.38■■□□□ 1.17
CDHR3Q6ZTQ4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDHR3Q6ZTQ4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDHR3Q6ZTQ4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CDHR3Q6ZTQ4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDHR3Q6ZTQ4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDHR3Q6ZTQ4 AC127496.7-201ENST00000625110 1798 ntBASIC22.38■■□□□ 1.17
CDHR3Q6ZTQ4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDHR3Q6ZTQ4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.37■■□□□ 1.17
CDHR3Q6ZTQ4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDHR3Q6ZTQ4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDHR3Q6ZTQ4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.37■■□□□ 1.17
CDHR3Q6ZTQ4 UNC93B8-201ENST00000511903 705 ntBASIC22.37■■□□□ 1.17
CDHR3Q6ZTQ4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.37■■□□□ 1.17
CDHR3Q6ZTQ4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDHR3Q6ZTQ4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDHR3Q6ZTQ4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.36■■□□□ 1.17
CDHR3Q6ZTQ4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDHR3Q6ZTQ4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.36■■□□□ 1.17
CDHR3Q6ZTQ4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.36■■□□□ 1.17
CDHR3Q6ZTQ4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CDHR3Q6ZTQ4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.36■■□□□ 1.17
CDHR3Q6ZTQ4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.36■■□□□ 1.17
CDHR3Q6ZTQ4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.36■■□□□ 1.17
CDHR3Q6ZTQ4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.35■■□□□ 1.17
CDHR3Q6ZTQ4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDHR3Q6ZTQ4 AC092028.1-203ENST00000608262 953 ntBASIC22.35■■□□□ 1.17
CDHR3Q6ZTQ4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.35■■□□□ 1.17
CDHR3Q6ZTQ4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR3Q6ZTQ4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.34■■□□□ 1.17
CDHR3Q6ZTQ4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR3Q6ZTQ4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR3Q6ZTQ4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR3Q6ZTQ4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.34■■□□□ 1.17
CDHR3Q6ZTQ4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.34■■□□□ 1.17
CDHR3Q6ZTQ4 TSPY9P-201ENST00000440215 945 ntBASIC22.34■■□□□ 1.17
CDHR3Q6ZTQ4 TSPY11P-201ENST00000442607 1045 ntBASIC22.34■■□□□ 1.17
CDHR3Q6ZTQ4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.34■■□□□ 1.17
CDHR3Q6ZTQ4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CDHR3Q6ZTQ4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR3Q6ZTQ4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CDHR3Q6ZTQ4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
CDHR3Q6ZTQ4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDHR3Q6ZTQ4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDHR3Q6ZTQ4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDHR3Q6ZTQ4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDHR3Q6ZTQ4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.33■■□□□ 1.17
CDHR3Q6ZTQ4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDHR3Q6ZTQ4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CDHR3Q6ZTQ4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.33■■□□□ 1.17
CDHR3Q6ZTQ4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms