Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL13A1Q5TAT6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL13A1Q5TAT6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.8■■□□□ 1.72
COL13A1Q5TAT6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL13A1Q5TAT6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.8■■□□□ 1.72
COL13A1Q5TAT6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.8■■□□□ 1.72
COL13A1Q5TAT6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC25.8■■□□□ 1.72
COL13A1Q5TAT6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.8■■□□□ 1.72
COL13A1Q5TAT6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL13A1Q5TAT6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.79■■□□□ 1.72
COL13A1Q5TAT6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.79■■□□□ 1.72
COL13A1Q5TAT6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
COL13A1Q5TAT6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC25.79■■□□□ 1.72
COL13A1Q5TAT6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC25.79■■□□□ 1.72
COL13A1Q5TAT6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
COL13A1Q5TAT6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
COL13A1Q5TAT6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
COL13A1Q5TAT6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL13A1Q5TAT6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL13A1Q5TAT6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL13A1Q5TAT6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
COL13A1Q5TAT6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL13A1Q5TAT6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
COL13A1Q5TAT6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.78■■□□□ 1.72
COL13A1Q5TAT6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL13A1Q5TAT6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL13A1Q5TAT6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.77■■□□□ 1.72
COL13A1Q5TAT6 AL139393.2-201ENST00000608721 2025 ntBASIC25.77■■□□□ 1.72
COL13A1Q5TAT6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL13A1Q5TAT6 AC010525.1-201ENST00000585559 441 ntBASIC25.77■■□□□ 1.72
COL13A1Q5TAT6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC25.77■■□□□ 1.72
COL13A1Q5TAT6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
COL13A1Q5TAT6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
COL13A1Q5TAT6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL13A1Q5TAT6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.76■■□□□ 1.71
COL13A1Q5TAT6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL13A1Q5TAT6 UNC93B5-201ENST00000530315 699 ntBASIC25.76■■□□□ 1.71
COL13A1Q5TAT6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.76■■□□□ 1.71
COL13A1Q5TAT6 TK2-213ENST00000563369 882 ntTSL 5 BASIC25.76■■□□□ 1.71
COL13A1Q5TAT6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC25.76■■□□□ 1.71
COL13A1Q5TAT6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
COL13A1Q5TAT6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL13A1Q5TAT6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.76■■□□□ 1.71
COL13A1Q5TAT6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL13A1Q5TAT6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.75■■□□□ 1.71
COL13A1Q5TAT6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL13A1Q5TAT6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.75■■□□□ 1.71
COL13A1Q5TAT6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL13A1Q5TAT6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL13A1Q5TAT6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC25.75■■□□□ 1.71
COL13A1Q5TAT6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.75■■□□□ 1.71
COL13A1Q5TAT6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
COL13A1Q5TAT6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL13A1Q5TAT6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL13A1Q5TAT6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
COL13A1Q5TAT6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC25.74■■□□□ 1.71
COL13A1Q5TAT6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.74■■□□□ 1.71
COL13A1Q5TAT6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.74■■□□□ 1.71
COL13A1Q5TAT6 AC133552.2-202ENST00000575694 574 ntBASIC25.74■■□□□ 1.71
COL13A1Q5TAT6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
COL13A1Q5TAT6 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.73■■□□□ 1.71
COL13A1Q5TAT6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.73■■□□□ 1.71
COL13A1Q5TAT6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC25.73■■□□□ 1.71
COL13A1Q5TAT6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL13A1Q5TAT6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.73■■□□□ 1.71
COL13A1Q5TAT6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL13A1Q5TAT6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL13A1Q5TAT6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL13A1Q5TAT6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.72■■□□□ 1.71
COL13A1Q5TAT6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
COL13A1Q5TAT6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
COL13A1Q5TAT6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
COL13A1Q5TAT6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC25.72■■□□□ 1.71
COL13A1Q5TAT6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC25.72■■□□□ 1.71
COL13A1Q5TAT6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC25.72■■□□□ 1.71
COL13A1Q5TAT6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.72■■□□□ 1.71
COL13A1Q5TAT6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.72■■□□□ 1.71
COL13A1Q5TAT6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
COL13A1Q5TAT6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
COL13A1Q5TAT6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL13A1Q5TAT6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL13A1Q5TAT6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL13A1Q5TAT6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
COL13A1Q5TAT6 UBE2SP1-201ENST00000450587 669 ntBASIC25.71■■□□□ 1.71
COL13A1Q5TAT6 KRT18P35-201ENST00000510488 1269 ntBASIC25.71■■□□□ 1.71
COL13A1Q5TAT6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC25.71■■□□□ 1.71
COL13A1Q5TAT6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL13A1Q5TAT6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL13A1Q5TAT6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.7■■□□□ 1.71
COL13A1Q5TAT6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.7■■□□□ 1.7
COL13A1Q5TAT6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
COL13A1Q5TAT6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC25.7■■□□□ 1.7
COL13A1Q5TAT6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.7■■□□□ 1.7
COL13A1Q5TAT6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
COL13A1Q5TAT6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL13A1Q5TAT6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL13A1Q5TAT6 ARMC10P1-201ENST00000313754 855 ntBASIC25.69■■□□□ 1.7
COL13A1Q5TAT6 MIR718-201ENST00000390190 70 ntBASIC25.69■■□□□ 1.7
COL13A1Q5TAT6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
COL13A1Q5TAT6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms