Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBR4Q5T4S7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
UBR4Q5T4S7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBR4Q5T4S7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBR4Q5T4S7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
UBR4Q5T4S7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBR4Q5T4S7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBR4Q5T4S7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBR4Q5T4S7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.53□□□□□ -0.4
UBR4Q5T4S7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC12.53□□□□□ -0.4
UBR4Q5T4S7 ESRRAP1-201ENST00000400596 1257 ntBASIC12.53□□□□□ -0.4
UBR4Q5T4S7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
UBR4Q5T4S7 AC012306.2-201ENST00000609350 630 ntBASIC12.53□□□□□ -0.4
UBR4Q5T4S7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.52□□□□□ -0.4
UBR4Q5T4S7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.52□□□□□ -0.4
UBR4Q5T4S7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBR4Q5T4S7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
UBR4Q5T4S7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC12.52□□□□□ -0.41
UBR4Q5T4S7 KRT19P1-201ENST00000405746 1186 ntBASIC12.52□□□□□ -0.41
UBR4Q5T4S7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UBR4Q5T4S7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
UBR4Q5T4S7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
UBR4Q5T4S7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBR4Q5T4S7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UBR4Q5T4S7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBR4Q5T4S7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
UBR4Q5T4S7 AC231657.2-201ENST00000624556 255 ntBASIC12.51□□□□□ -0.41
UBR4Q5T4S7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC12.51□□□□□ -0.41
UBR4Q5T4S7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBR4Q5T4S7 KRT18P35-201ENST00000510488 1269 ntBASIC12.51□□□□□ -0.41
UBR4Q5T4S7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBR4Q5T4S7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBR4Q5T4S7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBR4Q5T4S7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC12.51□□□□□ -0.41
UBR4Q5T4S7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC12.51□□□□□ -0.41
UBR4Q5T4S7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBR4Q5T4S7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.51□□□□□ -0.41
UBR4Q5T4S7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.51□□□□□ -0.41
UBR4Q5T4S7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
UBR4Q5T4S7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC12.51□□□□□ -0.41
UBR4Q5T4S7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 RN7SL850P-201ENST00000579959 291 ntBASIC12.5□□□□□ -0.41
UBR4Q5T4S7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC12.5□□□□□ -0.41
UBR4Q5T4S7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC12.5□□□□□ -0.41
UBR4Q5T4S7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 AC009086.3-201ENST00000623486 1008 ntBASIC12.49□□□□□ -0.41
UBR4Q5T4S7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 Z99916.2-201ENST00000604037 246 ntBASIC12.49□□□□□ -0.41
UBR4Q5T4S7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 POU5F1P4-201ENST00000413175 1085 ntBASIC12.49□□□□□ -0.41
UBR4Q5T4S7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 DUX4L16-201ENST00000555130 1264 ntBASIC12.49□□□□□ -0.41
UBR4Q5T4S7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBR4Q5T4S7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 MIR718-201ENST00000390190 70 ntBASIC12.48□□□□□ -0.41
UBR4Q5T4S7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms